DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGIFLD
Uniprot ID:
O00478
Source protein:
Butyrophilin subfamily 3 member A3
Source gene:
BTN3A3
Class:
LIG_APCC_ABBA_1
Location:
461:466
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5632
ASA_SCORE:
11.75
COIL:
0.0203
CONS_SCORE:
0.7147
DSS_SCORE:
0.3013
HELIX:
0.0015
FCONS_SCORE:
1.362
RIG_SCORE:
0.854
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V461A
TCGA-AX-A2HD
UCEC
TCGA
VGIFLD
LIG_APCC_ABBA_1
0.6936
p.T469P
TCGA-BH-A0HU
BRCA
TCGA
VGIFLD
LIG_APCC_ABBA_1
0.25
p.E468D
TCGA-D8-A1J9
BRCA
TCGA
VGIFLD
LIG_APCC_ABBA_1
0.2778
p.P458S
TCGA-EE-A181
SKCM
TCGA
VGIFLD
LIG_APCC_ABBA_1
0.25
p.E468Q
TCGA-G2-AA3D
BLCA
TCGA
VGIFLD
LIG_APCC_ABBA_1
0.2778
p.V469A
DO224684
BRCA
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.25
p.P457A
DO227709
COCA
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.2222
p.L460M
DO227709
COCA
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.3056
p.L453F
DO14188
HNSC
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.2222
p.K467E
DO52030
HNSC
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.3056
p.A459S
DO229009
LICA
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.2778
p.E456Q
DO223721
LUSC
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.1944
p.R451I
DO47763
STAD
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.0556
p.V469E
DO42177
UCEC
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.25
p.S472F
DO42713
UCEC
ICGC
VGIFLD
LIG_APCC_ABBA_1
0.1667
p.K460N
SIDM02029
Colorectal Carcinoma
GDSC
VGIFLD
LIG_APCC_ABBA_1
0.3056
p.N451S
SIDM00963
Breast Carcinoma
GDSC
VGIFLD
LIG_APCC_ABBA_1
0.0556
p.I463V
SIDM00168
Head and Neck Carcinoma
GDSC
VGIFLD
LIG_APCC_ABBA_1
0.5965
p.I463V
SIDM00173
Head and Neck Carcinoma
GDSC
VGIFLD
LIG_APCC_ABBA_1
0.5965
p.F464I
SIDM00168
Head and Neck Carcinoma
GDSC
VGIFLD
LIG_APCC_ABBA_1
0.7415
p.F464I
SIDM00173
Head and Neck Carcinoma
GDSC
VGIFLD
LIG_APCC_ABBA_1
0.7415
p.T454I
ACH-001696
Head and Neck Cancer
CCLE
VGIFLD
LIG_APCC_ABBA_1
0.1389
p.P457T
ACH-002280
Neuroblastoma
CCLE
VGIFLD
LIG_APCC_ABBA_1
0.2222
p.P457T
NB13
autonomic_ganglia
COSMIC
VGIFLD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with BTN3A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGIFLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00478
Butyrophilin subfamily 3 member A3
LIG_APCC_ABBA_1
461:466
VGIFLD
APC,CDC20,FZR1
0.5632
More...
O75677
Ret finger protein-like 1
LIG_APCC_ABBA_1
245:250
VGIFLD
APC,CDC20,FZR1
0.6529
More...
O75679
Ret finger protein-like 3
LIG_APCC_ABBA_1
245:250
VGIFLD
APC,CDC20,FZR1
0.5402
More...
Q9HCM9
E3 ubiquitin-protein ligase TRIM39
LIG_APCC_ABBA_1
458:463
VGIFLD
APC,CDC20,FZR1
0.6444
More...
O75678
Ret finger protein-like 2
LIG_APCC_ABBA_1
306:311
VGIFLD
APC,CDC20,FZR1
0.6529
More...