DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGTTT
Uniprot ID:
P63010
Source protein:
AP-2 complex subunit beta
Source gene:
AP2B1
Class:
DEG_SPOP_SBC_1
Location:
607:611
E3 ligase:
SPOP
DEGRON score:
0.9877
ASA_SCORE:
72.8
COIL:
0.8662
CONS_SCORE:
0.2623
DSS_SCORE:
0.6813
HELIX:
0.088
FCONS_SCORE:
0.9948
RIG_SCORE:
0.6604
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L615P
TCGA-AA-3492
COAD
TCGA
VGTTT
DEG_SPOP_SBC_1
0.2222
p.L615P
DO8224
COAD
ICGC
VGTTT
DEG_SPOP_SBC_1
0.2222
p.T613M
TCGA-CM-6171
COAD
TCGA
VGTTT
DEG_SPOP_SBC_1
0.2778
p.T613M
DO8151
COAD
ICGC
VGTTT
DEG_SPOP_SBC_1
0.2778
p.Q619K
TCGA-DS-A1OC
CESC
TCGA
VGTTT
DEG_SPOP_SBC_1
0.1111
p.Q619K
DO6329
CESC
ICGC
VGTTT
DEG_SPOP_SBC_1
0.1111
p.G598R
TCGA-VP-A87E
PRAD
TCGA
VGTTT
DEG_SPOP_SBC_1
0.0833
p.G598R
DO51387
PRAD
ICGC
VGTTT
DEG_SPOP_SBC_1
0.0833
p.G598E
TCGA-VP-A87E
PRAD
TCGA
VGTTT
DEG_SPOP_SBC_1
0.0833
p.G598E
DO51387
PRAD
ICGC
VGTTT
DEG_SPOP_SBC_1
0.0833
p.A612T
TCGA-ZF-AA53
BLCA
TCGA
VGTTT
DEG_SPOP_SBC_1
0.3056
p.A612T
DO219096
BLCA
ICGC
VGTTT
DEG_SPOP_SBC_1
0.3056
p.N614S
ACH-001147
Lymphoma
CCLE
VGTTT
DEG_SPOP_SBC_1
0.25
p.Q611H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VGTTT
DEG_SPOP_SBC_1
0.7582
Drug responses associated with AP2B1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P63010
AP-2 complex subunit beta
DEG_SPOP_SBC_1
607:611
VGTTT
SPOP
0.9877
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7125:7129
VGTTT
SPOP
0.9976
More...
Q86T24
Transcriptional regulator Kaiso
DEG_SPOP_SBC_1
627:631
VGTTT
SPOP
0.6009
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
6597:6601
VGTTT
SPOP
0.9955
More...
Q92733
Proline-rich protein PRCC
DEG_SPOP_SBC_1
233:237
VGTTT
SPOP
0.9958
More...