DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VGTTT
Uniprot ID:
Q92733
Source protein:
Proline-rich protein PRCC
Source gene:
PRCC
Class:
DEG_SPOP_SBC_1
Location:
233:237
E3 ligase:
SPOP
DEGRON score:
0.9958
ASA_SCORE:
84.74
COIL:
0.9486
CONS_SCORE:
0.2977
DSS_SCORE:
0.5592
HELIX:
0.016
FCONS_SCORE:
0.8457
RIG_SCORE:
0.6767
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P231S
TCGA-BF-A1PZ
SKCM
TCGA
VGTTT
DEG_SPOP_SBC_1
0.2778
p.P231S
DO50279
SKCM
ICGC
VGTTT
DEG_SPOP_SBC_1
0.2778
p.S227F
TCGA-CQ-7063
HNSC
TCGA
VGTTT
DEG_SPOP_SBC_1
0.1667
p.S227F
DO14702
HNSC
ICGC
VGTTT
DEG_SPOP_SBC_1
0.1667
p.T238I
TCGA-DA-A95X
SKCM
TCGA
VGTTT
DEG_SPOP_SBC_1
0.75
p.T238I
DO219480
SKCM
ICGC
VGTTT
DEG_SPOP_SBC_1
0.75
p.I245V
TCGA-DK-A2I6
BLCA
TCGA
VGTTT
DEG_SPOP_SBC_1
0.1111
p.I245V
DO798
BLCA
ICGC
VGTTT
DEG_SPOP_SBC_1
0.1111
p.I245M
TCGA-FD-A6TC
BLCA
TCGA
VGTTT
DEG_SPOP_SBC_1
0.1111
p.I245M
DO49755
BLCA
ICGC
VGTTT
DEG_SPOP_SBC_1
0.1111
p.S243C
TCGA-GU-AATP
BLCA
TCGA
VGTTT
DEG_SPOP_SBC_1
0.6111
p.S243C
DO51894
BLCA
ICGC
VGTTT
DEG_SPOP_SBC_1
0.6111
p.L229F
SIDM00466
Ovarian Carcinoma
GDSC
VGTTT
DEG_SPOP_SBC_1
0.2222
p.L229F
SIDM00018
Acute Myeloid Leukemia
GDSC
VGTTT
DEG_SPOP_SBC_1
0.2222
p.L229F
SIDM01444
Glioblastoma
GDSC
VGTTT
DEG_SPOP_SBC_1
0.2222
p.L229F
KO52
haematopoietic_and_lymphoid_tissue
COSMIC
VGTTT
DEG_SPOP_SBC_1
0.2222
p.L229F
OVKATE
ovary
COSMIC
VGTTT
DEG_SPOP_SBC_1
0.2222
p.P231L
SIDM01757
Bladder Carcinoma
GDSC
VGTTT
DEG_SPOP_SBC_1
0.2778
p.P231L
ACH-000741
Bladder Cancer
CCLE
VGTTT
DEG_SPOP_SBC_1
0.2778
p.S228C
SIDM01776
Plasma Cell Myeloma
GDSC
VGTTT
DEG_SPOP_SBC_1
0.1944
p.S228C
ACH-001162
Myeloma
CCLE
VGTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with PRCC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P63010
AP-2 complex subunit beta
DEG_SPOP_SBC_1
607:611
VGTTT
SPOP
0.9877
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7125:7129
VGTTT
SPOP
0.9976
More...
Q86T24
Transcriptional regulator Kaiso
DEG_SPOP_SBC_1
627:631
VGTTT
SPOP
0.6009
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
6597:6601
VGTTT
SPOP
0.9955
More...
Q92733
Proline-rich protein PRCC
DEG_SPOP_SBC_1
233:237
VGTTT
SPOP
0.9958
More...