DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
VITTT
Uniprot ID:
O75603
Source protein:
Chorion-specific transcription factor GCMb
Source gene:
GCM2
Class:
DEG_SPOP_SBC_1
Location:
382:386
E3 ligase:
SPOP
DEGRON score:
0.7442
ASA_SCORE:
64.38
COIL:
0.608
CONS_SCORE:
0.4825
DSS_SCORE:
0.3512
HELIX:
0.0174
FCONS_SCORE:
1.0172
RIG_SCORE:
0.8461
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S390Y
TCGA-A5-A0GW
UCEC
TCGA
VITTT
DEG_SPOP_SBC_1
0.2222
p.S390Y
DO41103
UCEC
ICGC
VITTT
DEG_SPOP_SBC_1
0.2222
p.V382M
TCGA-AR-A0TQ
BRCA
TCGA
VITTT
DEG_SPOP_SBC_1
0.7208
p.V382M
DO1623
BRCA
ICGC
VITTT
DEG_SPOP_SBC_1
0.7208
p.T381I
TCGA-EE-A2GC
SKCM
TCGA
VITTT
DEG_SPOP_SBC_1
0.3056
p.T381I
DO218906
SKCA
ICGC
VITTT
DEG_SPOP_SBC_1
0.3056
p.T381I
DO37839
SKCM
ICGC
VITTT
DEG_SPOP_SBC_1
0.3056
p.T386I
DO233109
GACA
ICGC
VITTT
DEG_SPOP_SBC_1
0.7078
p.P372L
DO220907
MELA
ICGC
VITTT
DEG_SPOP_SBC_1
0.0556
p.P396F
DO222843
MELA
ICGC
VITTT
DEG_SPOP_SBC_1
0.0556
p.T384A
SIDM01090
Colorectal Carcinoma
GDSC
VITTT
DEG_SPOP_SBC_1
0.7139
p.T384A
ACH-000943
Colon/Colorectal Cancer
CCLE
VITTT
DEG_SPOP_SBC_1
0.7139
p.T384A
RKO
large_intestine
COSMIC
VITTT
DEG_SPOP_SBC_1
0.7139
p.P377L
SIDM00578
Neuroblastoma
GDSC
VITTT
DEG_SPOP_SBC_1
0.1944
p.P377L
ACH-000804
Neuroblastoma
CCLE
VITTT
DEG_SPOP_SBC_1
0.1944
p.P377L
NB1
autonomic_ganglia
COSMIC
VITTT
DEG_SPOP_SBC_1
0.1944
p.A378T
SIDM01609
Endometrial Carcinoma
GDSC
VITTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with GCM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75603
Chorion-specific transcription factor GCMb
DEG_SPOP_SBC_1
382:386
VITTT
SPOP
0.7442
More...
P17275
Transcription factor JunB
DEG_SPOP_SBC_1
98:102
VITTT
SPOP
0.9993
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5155:5159
VITTT
SPOP
0.9393
More...
Q9H334
Forkhead box protein P1
DEG_SPOP_SBC_1
423:427
VITTT
SPOP
0.9878
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
302:306
VITTT
SPOP
0.7
More...