DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSST
Uniprot ID:
O94929
Source protein:
Actin-binding LIM protein 3
Source gene:
ABLIM3
Class:
DEG_SPOP_SBC_1
Location:
417:421
E3 ligase:
SPOP
DEGRON score:
0.9974
ASA_SCORE:
90.76
COIL:
0.9408
CONS_SCORE:
0.2793
DSS_SCORE:
0.6283
HELIX:
0.032
FCONS_SCORE:
1.2191
RIG_SCORE:
0.6256
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P410T
TCGA-97-8176
LUAD
TCGA
VRSST
DEG_SPOP_SBC_1
0.1389
p.P410T
DO218933
LUAD
ICGC
VRSST
DEG_SPOP_SBC_1
0.1389
p.R407Q
TCGA-EE-A2M5
SKCM
TCGA
VRSST
DEG_SPOP_SBC_1
0.0556
p.R407Q
DO222423
MELA
ICGC
VRSST
DEG_SPOP_SBC_1
0.0556
p.R407Q
DO37425
SKCM
ICGC
VRSST
DEG_SPOP_SBC_1
0.0556
p.S420C
TCGA-GS-A9TW
DLBC
TCGA
VRSST
DEG_SPOP_SBC_1
0.7541
p.S420C
DO219915
DLBC
ICGC
VRSST
DEG_SPOP_SBC_1
0.7541
p.P410S
TCGA-IH-A3EA
SKCM
TCGA
VRSST
DEG_SPOP_SBC_1
0.1389
p.P410S
DO37667
SKCM
ICGC
VRSST
DEG_SPOP_SBC_1
0.1389
p.Y411C
DO222503
COCA
ICGC
VRSST
DEG_SPOP_SBC_1
0.6111
p.R407W
DO233767
GACA
ICGC
VRSST
DEG_SPOP_SBC_1
0.0556
p.S408L
DO233820
GACA
ICGC
VRSST
DEG_SPOP_SBC_1
0.0833
p.H412R
DO228909
LICA
ICGC
VRSST
DEG_SPOP_SBC_1
0.1944
p.M420I
DO24606
LUAD
ICGC
VRSST
DEG_SPOP_SBC_1
0.7618
p.H417Y
DO42713
UCEC
ICGC
VRSST
DEG_SPOP_SBC_1
0.7229
p.S419A
ACH-001991
Primary
CCLE
VRSST
DEG_SPOP_SBC_1
0.7588
p.P412L
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
VRSST
DEG_SPOP_SBC_1
0.1944
p.R409W
NCI-SNU-1
stomach
COSMIC
VRSST
DEG_SPOP_SBC_1
0.5556
p.R423W
NCI-H1048
lung
COSMIC
VRSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with ABLIM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75976
Carboxypeptidase D
DEG_SPOP_SBC_1
871:875
VRSST
SPOP
0.9797
More...
O94929
Actin-binding LIM protein 3
DEG_SPOP_SBC_1
417:421
VRSST
SPOP
0.9974
More...
P32019
Type II inositol 1,4,5-trisphosphate 5-phosphatase
DEG_SPOP_SBC_1
302:306
VRSST
SPOP
0.9691
More...
Q8NEQ6
Steroid receptor-associated and regulated protein
DEG_SPOP_SBC_1
145:149
VRSST
SPOP
0.9865
More...
Q14CZ0
Telomere attrition and p53 response 1 protein
DEG_SPOP_SBC_1
205:209
VRSST
SPOP
0.9684
More...