DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRSST
Uniprot ID:
P32019
Source protein:
Type II inositol 1,4,5-trisphosphate 5-phosphatase
Source gene:
INPP5B
Class:
DEG_SPOP_SBC_1
Location:
302:306
E3 ligase:
SPOP
DEGRON score:
0.9691
ASA_SCORE:
71.2
COIL:
0.6568
CONS_SCORE:
0.2474
DSS_SCORE:
0.4667
HELIX:
0.3152
FCONS_SCORE:
1.0483
RIG_SCORE:
0.7364
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q292H
TCGA-17-Z016
LUAD
TCGA
VRSST
DEG_SPOP_SBC_1
0.0556
p.T316I
TCGA-DF-A2KU
UCEC
TCGA
VRSST
DEG_SPOP_SBC_1
0.0556
p.Q309P
DO9876
COAD
ICGC
VRSST
DEG_SPOP_SBC_1
0.25
p.S304F
DO219892
DLBC
ICGC
VRSST
DEG_SPOP_SBC_1
0.7982
p.H314Y
DO26469
LUSC
ICGC
VRSST
DEG_SPOP_SBC_1
0.1111
p.R303C
DO45482
LUSC
ICGC
VRSST
DEG_SPOP_SBC_1
0.719
p.R303C
DO37703
SKCM
ICGC
VRSST
DEG_SPOP_SBC_1
0.719
p.R303C
DO37406
SKCM
ICGC
VRSST
DEG_SPOP_SBC_1
0.719
p.S305F
DO38099
SKCM
ICGC
VRSST
DEG_SPOP_SBC_1
0.7982
p.R303H
DO41379
UCEC
ICGC
VRSST
DEG_SPOP_SBC_1
0.7133
p.Y297C
SIDM01090
Colorectal Carcinoma
GDSC
VRSST
DEG_SPOP_SBC_1
0.1944
p.Y297C
ACH-000943
Colon/Colorectal Cancer
CCLE
VRSST
DEG_SPOP_SBC_1
0.1944
p.Y297C
RKO
large_intestine
COSMIC
VRSST
DEG_SPOP_SBC_1
0.1944
p.K312T
ACH-000539
Non-Cancerous
CCLE
VRSST
DEG_SPOP_SBC_1
0.6111
p.V296I
ACH-001030
Bone Cancer
CCLE
VRSST
DEG_SPOP_SBC_1
0.1667
p.E302D
HCC2998
large_intestine
COSMIC
VRSST
DEG_SPOP_SBC_1
0.6758
Drug responses associated with INPP5B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75976
Carboxypeptidase D
DEG_SPOP_SBC_1
871:875
VRSST
SPOP
0.9797
More...
O94929
Actin-binding LIM protein 3
DEG_SPOP_SBC_1
417:421
VRSST
SPOP
0.9974
More...
P32019
Type II inositol 1,4,5-trisphosphate 5-phosphatase
DEG_SPOP_SBC_1
302:306
VRSST
SPOP
0.9691
More...
Q8NEQ6
Steroid receptor-associated and regulated protein
DEG_SPOP_SBC_1
145:149
VRSST
SPOP
0.9865
More...
Q14CZ0
Telomere attrition and p53 response 1 protein
DEG_SPOP_SBC_1
205:209
VRSST
SPOP
0.9684
More...