Gene: GLDC

Basic information

Tag Content
Uniprot ID A0A2I3RPM1
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSPTRP00000066639
Ensembl nucleotide ID ENSPTRG00000029347
Gene name Glycine cleavage system P protein
Gene symbol GLDC
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description The glycine cleavage system catalyzes the degradation of glycine.
Sequence
SSLPVCENEI LATLHAISSK NQIWRSYIGM GYYNCSVPQT ILRNLLENSG WITQYTPYQP 60
EVSQGRLESL LNYQTMVCDI TGLDMANASL LDEGTAAAEA LQLCYRHNKR RKFFVDPRCH 120
PQTIAVVQTR AKYTGVLTEL KLPCEMDFSG KDVSGVLFQY PDTEGKVEDF TELVERAHQS 180
GSLACCATDL LALCILRPPG EFGVDIALGS SQRFGVPLGY GGPHAAFFAV RESLVRMMPG 240
RMVGVTRDAT GKEVYRLTLQ TREQHIRRDK ATSNICTAQA LLANMAAMFA IYHGSHGLEH 300
IARRVHNATL ILSEGLKRAG HQLQHDLFFD TLKIQCGCSV KEVLGRAAQR QINFRLFEDG 360
TLGISLDETV NEKDLDDLLW IFGCESSAEL VAESMGEECR GIPGSVFKRT SPFLTHQVFN 420
SYHSETNIVR YMKKLENKDI SLVHSMIPLG SCTMKLNSSS ELAPITWKEF ANIHPFVPLD 480
QAQGYQQLFR ELEKDLCELT GYDQVCFQPN SGAQGEYAGL ATIRAYLNQK GEGHRTVCLI 540
PKSAHGTNPA SAHMAGMKIQ PVEVDKYGNI DAVHLKAMVD KHKENLAAIM ITYPSTNGVF 600
EENISDVCDL IHQHGGQVYL DGANMNAQVG ICRPGDFGSD VSHLNLHKTF CIPHGGGGPG 660
MGPIGVKKHL APFLPNHPVI SLKRNEDACP VGTVSAAPWG SSSILPISWA YIKMMGGKGL 720
KQATETAILN ANYMAKRLEK HYRILFRGAR GYVGHEFILD TRPFKKSANI EAVDVAKRLQ 780
DYGFHAPTMS WPVAGTLMVE PTESEDKAEL DRFCDAMISI RQEIADIEEG RVDPRVNPLK 840
MSPHSLTCVT SSHWDRPYSR EVAAFPLPFV KPENKFWPTI ARIDDIYGDQ HLVCTCPPME 900
VYESPFSEQK RASS 914

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGLDC507688E1BJQ1Bos taurusPredictionMore>>
1:1 orthologGLDC481534A0A5F4C8B1Canis lupus familiarisPredictionMore>>
1:1 orthologGLDC102174205A0A452FM63Capra hircusPredictionMore>>
1:1 orthologGLDC2731P23378Homo sapiensPredictionMore>>
1:1 orthologGldc104174Q91W43CPOMus musculusPublicationMore>>
1:1 orthologGLDCA0A2I3RPM1Pan troglodytesPredictionMore>>
1:1 orthologA0A480TLS3Sus scrofaPredictionMore>>
1:1 orthologGLDC100343694G1SL36Oryctolagus cuniculusPredictionMore>>
1:1 orthologGldcA0A0G2JUZ5Rattus norvegicusPredictionMore>>
1:1 orthologgldcA0A0G2KSN1Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005739 mitochondrion
GO:0004375 glycine dehydrogenase (decarboxylating) activity
GO:0016829 lyase activity
GO:0006546 glycine catabolic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0496 Mitochondrion
KW-0560 Oxidoreductase
KW-0663 Pyridoxal phosphate
KW-1185 Reference proteome
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR001597 ArAA_b-elim_lyase/Thr_aldolase
IPR003437 GcvP
IPR020581 GDC_P
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01212 Beta_elim_lyase
PF02347 GDC-P