Gene: GLDC

Basic information

Tag Content
Uniprot ID E1BJQ1
Entrez ID 507688
Genbank protein ID
Genbank nucleotide ID NM_001192951.1
Ensembl protein ID ENSBTAP00000036556
Ensembl nucleotide ID ENSBTAG00000025903
Gene name Glycine cleavage system P protein
Gene symbol GLDC
Organism Bos taurus
NCBI taxa ID 9913
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description The glycine cleavage system catalyzes the degradation of glycine.
Sequence
MQTCARAWGL RLGCGVGGGR RLAGGAGPRW APRGRDRSSG GGDSGGAGAS RLLERLLPRH 60
DDFARRHIGP GDKDQKEMLQ ALGLASVDEL IEKTIPASIR LKRPLKMDDP VCENEILATL 120
HAISNKNQIW RSYIGMGYYN CSVPQTILRN LLENSGWITQ YTPYQPEVSQ GRLESLLNYQ 180
TMVCDITGLD MANASLLDEA TAAAEAMQLC HRQNKRRKFF VDPRCHPQTI AVVQTRAKYS 240
GVLIELKLPH EMDFSSKDVS GVLFQYPDTE GKVEDFTELV ERAHEAGSLA CCATDLLALC 300
ILRPPGEFGV DIALGSSQRF GVPLGYGGPH AAFFAVRENL VRMMPGRMVG VTRDVSGKEV 360
YRLALQTREQ HIRRDKATSN ICTAQALLAN MAVMFAIYHG SHGLEHIARR VHNATLILSE 420
GLKRAGHQLQ HDLFFDTLKI QCGCSVKEVL GRAAQRQINI RLFEDGTLGI SLDETVNEKD 480
LDDLLWIFGC ESSAELVAES MGEERRGILG TAFKRTSPFL THQVFNSYHS ETNIVRYMKR 540
LENKDISLVH SMIPLGSCTM KLNSSSELTP ITWKEFANIH PFVPLDQAQG YQQLFRELEK 600
DLCELTGYDR ISFQPNSGAQ GEYAGLASIR AYLDAKGETH RTVCLIPKSA HGTNPASAHM 660
AGMRIQPVEV DKYGNIDAAH LKAMVDKHKE NLAAIMITYP STNGVFEENI GDVCDLIHLH 720
GGQVYLDGAN MNAQVGLCRP GDFGSDVSHL NLHKTFCIPH GGGGPGMGPI GVKKHLVPFL 780
PNHPIISLKP SEDAQALGTV SAAPWGSSCI LPISWAYIKM MGGKGLKQAT EIAILNANYM 840
AKRLEKHYRV LFRGARGYVA HEFILDTRPF KKSANIEAVD VAKRLQDYGF HAPTMSWPVA 900
GTLMIEPTES EDKAELDRFC DAMISIRQEI ADIEEGRIDP RVNPLKMSPH SLTCVTSSHW 960
DRPYSREVAA FPLPFVKPEN KFWPTISRID DIYGDQHLVC TCPPMDVYES PFSEQKRASS 1020

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGLDC507688E1BJQ1Bos taurusPredictionMore>>
1:1 orthologGLDC481534A0A5F4C8B1Canis lupus familiarisPredictionMore>>
1:1 orthologGLDC102174205A0A452FM63Capra hircusPredictionMore>>
1:1 orthologGLDC2731P23378Homo sapiensPredictionMore>>
1:1 orthologGldc104174Q91W43CPOMus musculusPublicationMore>>
1:1 orthologGLDCA0A2I3RPM1Pan troglodytesPredictionMore>>
1:1 orthologA0A480TLS3Sus scrofaPredictionMore>>
1:1 orthologGLDC100343694G1SL36Oryctolagus cuniculusPredictionMore>>
1:1 orthologGldcA0A0G2JUZ5Rattus norvegicusPredictionMore>>
1:1 orthologgldcA0A0G2KSN1Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005960 glycine cleavage complex
GO:0005739 mitochondrion
GO:0016594 glycine binding
GO:0004375 glycine dehydrogenase (decarboxylating) activity
GO:0016829 lyase activity
GO:0030170 pyridoxal phosphate binding
GO:0019464 glycine decarboxylation via glycine cleavage system

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0496 Mitochondrion
KW-0560 Oxidoreductase
KW-0663 Pyridoxal phosphate
KW-1185 Reference proteome
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR001597 ArAA_b-elim_lyase/Thr_aldolase
IPR003437 GcvP
IPR020581 GDC_P
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01212 Beta_elim_lyase
PF02347 GDC-P