Gene: GLDC

Basic information

Tag Content
Uniprot ID A0A452FM63
Entrez ID 102174205
Genbank protein ID
Genbank nucleotide ID XM_018052009.1
Ensembl protein ID ENSCHIP00000025237
Ensembl nucleotide ID ENSCHIG00000022064
Gene name Glycine cleavage system P protein
Gene symbol GLDC
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description The glycine cleavage system catalyzes the degradation of glycine.
Sequence
MQTCARAWGL RLGCGVGGGR RLAGGAGPRW APRGRDRSSG GGDSGGAGAS RLLERLLPRH 60
DDFARRHIGP GDKDQKEMLQ ALGLASVDEL IEKTIPASIR LKRPLKMDDP VCENEILATL 120
HAISNKNQIW RSYIGMGYYN CSVPQTILRN LLENSGWITQ YTPYQPEVSQ GRLESLLNYQ 180
TMVCDITGLD MANASLLDEA TAAAEAMQLC HRQNKRRKFF VDPRCHPQTI AVVQTRAKYS 240
GVLIELKLPH EMDFSGKDVS GVLFQYPDTE GKVEDFTELV ERAHEAGSLA CCATDLLALC 300
ILRPPGEFGV DIALGSSQRF GVPLGYGGPH AAFFAVRENL VRMMPGRMVG VTRDVSGKEV 360
YRLALQTREQ HIRRDKATSN ICTAQALLAN MAVMFAIYHG SHGLEHIARR VHNATLILSE 420
GLKRAGHQLQ HDLFFDTLKI QCGCSAKEVL GRAAQRQINI RLFEDGTLGI SLDETVGEKD 480
LDDLLWIFGC ESSAELVAES MGEERRGILG TAFKRTSPFL THQVFNSYHS ETNIVRYMKR 540
LENKDISLVH SMIPLGSCTM KLNSSSELTP ITWKEFANIH PFVPLEQAQG YQQLFRELEK 600
DLCELTGYDQ ISFQPNSGAQ GEYAGLASIR AYLDAKGETH RTVCLIPKSA HGTNPASAHM 660
AGMKIQPVEV DKYGNIDAAH LKAMVDKHKE NLAAIMITYP STNGVFEENI GDVCDLIHQH 720
GGQVYLDGAN MNAQVGICRP GDFGSDVSHL NLHKTFCIPH GGGGPGMGPI GVKKHLVPFL 780
PNHPIISVKP SEDAQALGTV SAAPWGSSCI LPISWAYIKM MGGKGLKQAT EIAILNANYM 840
AKRLEKHYRV LFRGARGYVA HEFILDTRPF KKSANIEAVD VAKRLQDYGF HAPTMSWPVA 900
GTLMIEPTES EDKAELDRFC DAMISIRQEI ADIEEGRIDP RVNPLKMSPH SLTCVTSSHW 960
DRPYSREVAA FPLPFVKPEN KFWPTISRID DIYGDQHLVC TCPPMDVYES PFSEQKRASS 1020

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGLDC507688E1BJQ1Bos taurusPredictionMore>>
1:1 orthologGLDC481534A0A5F4C8B1Canis lupus familiarisPredictionMore>>
1:1 orthologGLDC102174205A0A452FM63Capra hircusPredictionMore>>
1:1 orthologGLDC2731P23378Homo sapiensPredictionMore>>
1:1 orthologGldc104174Q91W43CPOMus musculusPublicationMore>>
1:1 orthologGLDCA0A2I3RPM1Pan troglodytesPredictionMore>>
1:1 orthologA0A480TLS3Sus scrofaPredictionMore>>
1:1 orthologGLDC100343694G1SL36Oryctolagus cuniculusPredictionMore>>
1:1 orthologGldcA0A0G2JUZ5Rattus norvegicusPredictionMore>>
1:1 orthologgldcA0A0G2KSN1Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005739 mitochondrion
GO:0005654 nucleoplasm
GO:0005886 plasma membrane
GO:0004375 glycine dehydrogenase (decarboxylating) activity
GO:0016829 lyase activity
GO:0006546 glycine catabolic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0496 Mitochondrion
KW-0560 Oxidoreductase
KW-0663 Pyridoxal phosphate
KW-1185 Reference proteome
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR001597 ArAA_b-elim_lyase/Thr_aldolase
IPR003437 GcvP
IPR020581 GDC_P
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01212 Beta_elim_lyase
PF02347 GDC-P