Gene: GLDC

Basic information

Tag Content
Uniprot ID A0A5F4C8B1
Entrez ID 481534
Genbank protein ID
Genbank nucleotide ID XM_538655.5
Ensembl protein ID ENSCAFP00000049202
Ensembl nucleotide ID ENSCAFG00000001416
Gene name Glycine cleavage system P protein
Gene symbol GLDC
Organism Canis lupus familiaris
NCBI taxa ID 9615
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description The glycine cleavage system catalyzes the degradation of glycine.
Sequence
MQTCARAWGL RVGCGVGARG GGGGGRRLAA GAGPRWGPRA RDSSGDSSGA GDSRLLERLL 60
PRHDHFARRH IGPGDKDQRE MLQALGLASI DELIEKTVPA SIRLKRPLKM EDPVCENEIL 120
TKLHAISSKN QIWRSYMGMG YYNCFVPQTI LRNLLENAGW ITQYTPYQPE VSQGRLESLL 180
NYQTMVCDIT GMDMANASLL DEATAAAEAM QLCHRHNKRK RFFVDPRCHP QTIAVVQTRA 240
KYNGVLIELK LPHEMDFSGK DVSGVLFQYP DTEGKVEDFT ELVERAHQMG SLACCATDLL 300
ALCILKPPGE FGVDIALGSS QRFGVPLGYG GPHAAFFAVR ESLVRMMPGR MVGVTRDATG 360
KEVYRLALQT REQHIRRDKA TSNICTAQAL LANMAAMFAI YHGSRGLEHI ARRVHNATLI 420
LSEGLKRAGH QLQHDLFFDT LKIQCGCSVK EVLDRATQRQ VNFRLFEDGT LGISLDETVN 480
EKDLDDLLWI FGCESSAELV AESMGEEQRG IPGTAFKRTS SFLTHQVFNS YHSETNIVRY 540
MKKLENKDIS LVHSMIPLGS CTMKLNSSSE LTPITWKEFA NIHPFVPLDQ AQGYQQLFRE 600
LEKDLCELTG YDRISFQPNS GAQGEYAGLA TIRAYLDGKG EGHRTVCLIP KSAHGTNPAS 660
AHMAGMKIQP VEVDKYGNID TAHLKAMVDK HKENLAAIMI TYPSTNGVFE ENIGDVCDLI 720
HQNGGQVYLD GANMNAQVGI CRPGDFGSDV SHLNLHKTFC IPHGGGGPGM GPIGVKKHLA 780
PFLPNHPIVS VKPSEDDRPV GTVSAAPWGS SSILPISWAY IKMMGGKGLK QATEIAILNA 840
NYMAKRLEKH YRVLFRGARG YVAHEFILDT RPFKKSANIE AVDVAKRLQD YGFHAPTMSW 900
PVAGTLMVEP TESEDKAELD RFCDAMISIR QEIADIEEGR IDPRVNPLKM SPHSLTCVTS 960
SRWDRPYSRE VAAFPLPFVK PENKFWPTIA RIDDIYGDQH LVCTCPPMEV YESPFSEQKR 1020
ASS 1023

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGLDC507688E1BJQ1Bos taurusPredictionMore>>
1:1 orthologGLDC481534A0A5F4C8B1Canis lupus familiarisPredictionMore>>
1:1 orthologGLDC102174205A0A452FM63Capra hircusPredictionMore>>
1:1 orthologGLDC2731P23378Homo sapiensPredictionMore>>
1:1 orthologGldc104174Q91W43CPOMus musculusPublicationMore>>
1:1 orthologGLDCA0A2I3RPM1Pan troglodytesPredictionMore>>
1:1 orthologA0A480TLS3Sus scrofaPredictionMore>>
1:1 orthologGLDC100343694G1SL36Oryctolagus cuniculusPredictionMore>>
1:1 orthologGldcA0A0G2JUZ5Rattus norvegicusPredictionMore>>
1:1 orthologgldcA0A0G2KSN1Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005739 mitochondrion
GO:0004375 glycine dehydrogenase (decarboxylating) activity
GO:0016829 lyase activity
GO:0006546 glycine catabolic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0496 Mitochondrion
KW-0560 Oxidoreductase
KW-0663 Pyridoxal phosphate
KW-1185 Reference proteome
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR001597 ArAA_b-elim_lyase/Thr_aldolase
IPR003437 GcvP
IPR020581 GDC_P
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01212 Beta_elim_lyase
PF02347 GDC-P