Gene:

Basic information

Tag Content
Uniprot ID A0A480TLS3
Entrez ID
Genbank protein ID HDC26367.1; HDB60254.1;
Genbank nucleotide ID
Ensembl protein ID
Ensembl nucleotide ID
Gene name Glycine cleavage system P protein
Gene symbol
Organism Sus scrofa
NCBI taxa ID 9823
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description The glycine cleavage system catalyzes the degradation of glycine.
Sequence
MQTCARAWGL RLGCGVGGSR RLAGGAGLRW APSGRDSSSG GGDGGGDSRG AAASRLLERL 60
LPRHDDFARR HIGPGDKDQR EMLQALGLAS VDELIEKTVP ASIRLKRPLK MDDPICENEI 120
LATLHAISSK NQIWRSYIGM GYYNCSVPQT ILRNLLENSG WITQYTPYQP EVSQGRLESL 180
LNYQTMVCDI TGMDTANASL LDEGTAAAEA MQLCHRHNKR RKFFVDPRCH PQTIAVIQTR 240
AKYAGVLIEL KLPHEMDFSG KDVSGVLFQY PDTEGKVEDF TELVERAHQA GSLACCATDL 300
LALCILKPPG EFGVDIALGS SQRFGVPLGY GGPHAAFFAV RESLVRMMPG RMVGVTRDAS 360
GKEVYRLALQ TREQHIRRDK ATSNICTAQA LLANMAAMFA IYHGSHGLEH IARRVHNATL 420
ILSEGLKRAG HQLQHNLFFD TLKIHCGCSV KEVLGRAAQR QINIRLFEDD TLGISLDETV 480
NEKDLDDLLW IFGCESSAEL VAESMGEEQR GILGTAFKRT SPFLTHQVFN SYHSETNIVR 540
YMKKLENKDI SLVHSMIPLG SCTMKLNSSS ELTPITWKEF ANIHPFVPLD QAQGYQQLFQ 600
ELEKDLCELT GYDRISFQPN SGAQGEYAGL ATIRAYLDQK GERHRVVCLI PKSAHGTNPA 660
SAHMAGMKIQ PIEVDKYGNI DVAHLKAMVD KHKENLAAIM ITYPSTNGVF EENIGDVCDL 720
IHQHGGQVYL DGANMNAQVG ICRPGDFGSD VSHLNLHKTF CIPHGGGGPG MGPIGVKKHL 780
VPFLPNHPII SVKPSEDAQP LGTVSAAPWG SSSILPISWA YIKMMGGKGL KQATEIAILN 840
ANYMAKRLEK HYRVLFRGAR GYVAHEFILD TRPFKKSANI EAVDVAKRLQ DYGFHAPTMS 900
WPVAGTLMIE PTESEDKAEL DRFCDAMISI RQEISDIEEG RIDPRVNPLK MSPHSLTCVT 960
SSHWDRPYSR EVAAFPLPFV KPENKFWPTI ARIDDIYGDQ HLVCTCPPMD VYESPFSEQK 1020
RASS 1024

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGLDC507688E1BJQ1Bos taurusPredictionMore>>
1:1 orthologGLDC481534A0A5F4C8B1Canis lupus familiarisPredictionMore>>
1:1 orthologGLDC102174205A0A452FM63Capra hircusPredictionMore>>
1:1 orthologGLDC2731P23378Homo sapiensPredictionMore>>
1:1 orthologGldc104174Q91W43CPOMus musculusPublicationMore>>
1:1 orthologGLDCA0A2I3RPM1Pan troglodytesPredictionMore>>
1:1 orthologA0A480TLS3Sus scrofaPredictionMore>>
1:1 orthologGLDC100343694G1SL36Oryctolagus cuniculusPredictionMore>>
1:1 orthologGldcA0A0G2JUZ5Rattus norvegicusPredictionMore>>
1:1 orthologgldcA0A0G2KSN1Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005739 mitochondrion
GO:0004375 glycine dehydrogenase (decarboxylating) activity
GO:0016829 lyase activity
GO:0006546 glycine catabolic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0496 Mitochondrion
KW-0560 Oxidoreductase
KW-0663 Pyridoxal phosphate
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR001597 ArAA_b-elim_lyase/Thr_aldolase
IPR003437 GcvP
IPR020581 GDC_P
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01212 Beta_elim_lyase
PF02347 GDC-P