DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AMTST
Uniprot ID:
Q9UGU0
Source protein:
Transcription factor 20
Source gene:
TCF20
Class:
DEG_SPOP_SBC_1
Location:
1463:1467
E3 ligase:
SPOP
DEGRON score:
0.5189
ASA_SCORE:
85.22
COIL:
0.8278
CONS_SCORE:
0.4171
DSS_SCORE:
0.8007
HELIX:
0.0362
FCONS_SCORE:
0.9465
RIG_SCORE:
0.6216
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1476L
TCGA-39-5011
LUSC
TCGA
AMTST
DEG_SPOP_SBC_1
0.0833
p.Q1476L
DO27532
LUSC
ICGC
AMTST
DEG_SPOP_SBC_1
0.0833
p.G1457R
TCGA-AP-A0LM
UCEC
TCGA
AMTST
DEG_SPOP_SBC_1
0.1667
p.G1457R
DO43306
UCEC
ICGC
AMTST
DEG_SPOP_SBC_1
0.1667
p.A1463V
TCGA-AX-A06F
UCEC
TCGA
AMTST
DEG_SPOP_SBC_1
0.5825
p.A1463V
DO41752
UCEC
ICGC
AMTST
DEG_SPOP_SBC_1
0.5825
p.A1456T
ACH-001518
Endometrial/Uterine Cancer
CCLE
AMTST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with TCF20 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1380:1384
AMTST
SPOP
0.6573
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3003:3007
AMTST
SPOP
0.95
More...
Q9H987
Synaptopodin 2-like protein
DEG_SPOP_SBC_1
575:579
AMTST
SPOP
0.9382
More...
Q9NP60
X-linked interleukin-1 receptor accessory protein-like 2
DEG_SPOP_SBC_1
588:592
AMTST
SPOP
0.5216
More...
Q9UGU0
Transcription factor 20
DEG_SPOP_SBC_1
1463:1467
AMTST
SPOP
0.5189
More...