DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSDS
Uniprot ID:
Q8WXG6
Source protein:
MAP kinase-activating death domain protein
Source gene:
MADD
Class:
DEG_SCF_TRCP1_1
Location:
620:625
E3 ligase:
BTRC
DEGRON score:
0.9983
ASA_SCORE:
70.8833
COIL:
0.9152
CONS_SCORE:
0.514
DSS_SCORE:
0.7981
HELIX:
0.0593
FCONS_SCORE:
1.1152
RIG_SCORE:
0.5561
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M626V
TCGA-CN-6016
HNSC
TCGA
DSGSDS
DEG_SCF_TRCP1_1
0.3056
p.M626V
DO14470
HNSC
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.3056
p.S615F
TCGA-D3-A51G
SKCM
TCGA
DSGSDS
DEG_SCF_TRCP1_1
0.1944
p.S615F
DO47700
SKCM
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.1944
p.R611L
DO228474
LICA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.0833
p.R611L
DO228806
LICA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.0833
p.S634F
DO229054
LICA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.0833
p.G622A
SIDM02032
Pancreatic Carcinoma
GDSC
DSGSDS
DEG_SCF_TRCP1_1
0.754
p.D620G
SIDM01257
Hepatocellular Carcinoma
GDSC
DSGSDS
DEG_SCF_TRCP1_1
0.7198
p.D620G
SIDM00062
Hepatocellular Carcinoma
GDSC
DSGSDS
DEG_SCF_TRCP1_1
0.7198
p.D620G
ACH-000671
Liver Cancer
CCLE
DSGSDS
DEG_SCF_TRCP1_1
0.7198
p.D620G
ACH-002395
Liver Cancer
CCLE
DSGSDS
DEG_SCF_TRCP1_1
0.7198
p.D620G
HUH-6-clone5
liver
COSMIC
DSGSDS
DEG_SCF_TRCP1_1
0.7198
Drug responses associated with MADD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30203
T-cell differentiation antigen CD6
DEG_SCF_TRCP1_1
479:484
DSGSDS
BTRC
0.987
More...
Q6PI26
Protein SHQ1 homolog
DEG_SCF_TRCP1_1
470:475
DSGSDS
BTRC
0.7439
More...
Q8WVC0
RNA polymerase-associated protein LEO1
DEG_SCF_TRCP1_1
22:27
DSGSDS
BTRC
0.9469
More...
Q8WXG6
MAP kinase-activating death domain protein
DEG_SCF_TRCP1_1
620:625
DSGSDS
BTRC
0.9983
More...
Q9UPA5
Protein bassoon
DEG_SCF_TRCP1_1
2638:2643
DSGSDS
BTRC
0.9935
More...