DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSGSDS
Uniprot ID:
Q9UPA5
Source protein:
Protein bassoon
Source gene:
BSN
Class:
DEG_SCF_TRCP1_1
Location:
2638:2643
E3 ligase:
BTRC
DEGRON score:
0.9935
ASA_SCORE:
87.4167
COIL:
0.9298
CONS_SCORE:
0.9956
DSS_SCORE:
0.685
HELIX:
0.0552
FCONS_SCORE:
1.0924
RIG_SCORE:
0.4914
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D2642N
TCGA-DR-A0ZM
CESC
TCGA
DSGSDS
DEG_SCF_TRCP1_1
0.5821
p.D2642N
DO6254
CESC
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.5821
p.R2635C
TCGA-G3-A25S
LIHC
TCGA
DSGSDS
DEG_SCF_TRCP1_1
0.25
p.R2635C
DO23018
LIHC
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.25
p.R2628C
DO233782
GACA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.0556
p.R2632C
DO233888
GACA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.1667
p.R2635L
DO229015
LICA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.25
p.R2628L
DO229037
LICA
ICGC
DSGSDS
DEG_SCF_TRCP1_1
0.0556
p.P2634S
SIDM00845
Burkitt's Lymphoma
GDSC
DSGSDS
DEG_SCF_TRCP1_1
0.2222
p.P2634S
SIDM00170
Head and Neck Carcinoma
GDSC
DSGSDS
DEG_SCF_TRCP1_1
0.2222
p.P2634S
ACH-000196
Breast Cancer
CCLE
DSGSDS
DEG_SCF_TRCP1_1
0.2222
p.P2634S
ACH-000682
Head and Neck Cancer
CCLE
DSGSDS
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with BSN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30203
T-cell differentiation antigen CD6
DEG_SCF_TRCP1_1
479:484
DSGSDS
BTRC
0.987
More...
Q6PI26
Protein SHQ1 homolog
DEG_SCF_TRCP1_1
470:475
DSGSDS
BTRC
0.7439
More...
Q8WVC0
RNA polymerase-associated protein LEO1
DEG_SCF_TRCP1_1
22:27
DSGSDS
BTRC
0.9469
More...
Q8WXG6
MAP kinase-activating death domain protein
DEG_SCF_TRCP1_1
620:625
DSGSDS
BTRC
0.9983
More...
Q9UPA5
Protein bassoon
DEG_SCF_TRCP1_1
2638:2643
DSGSDS
BTRC
0.9935
More...