DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
GKENL
Uniprot ID:
Q15768
Source protein:
Ephrin-B3
Source gene:
EFNB3
Class:
DEG_APCC_KENBOX_2
Location:
199:203
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8597
ASA_SCORE:
79.52
COIL:
0.8538
CONS_SCORE:
0.466
DSS_SCORE:
0.7939
HELIX:
0.0686
FCONS_SCORE:
1.0145
RIG_SCORE:
0.5297
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P207H
TCGA-95-7039
LUAD
TCGA
GKENL
DEG_APCC_KENBOX_2
0.2222
p.P207H
DO23907
LUAD
ICGC
GKENL
DEG_APCC_KENBOX_2
0.2222
p.A193D
TCGA-DM-A1D8
COAD
TCGA
GKENL
DEG_APCC_KENBOX_2
0.1667
p.A193D
DO8914
COAD
ICGC
GKENL
DEG_APCC_KENBOX_2
0.1667
p.N210S
TCGA-GN-A8LK
SKCM
TCGA
GKENL
DEG_APCC_KENBOX_2
0.1389
p.N210S
DO51259
SKCM
ICGC
GKENL
DEG_APCC_KENBOX_2
0.1389
p.A192T
DO223505
CLLE
ICGC
GKENL
DEG_APCC_KENBOX_2
0.1389
p.SR213SW
DO222824
MELA
ICGC
GKENL
DEG_APCC_KENBOX_2
0
p.H194R
DO229234
THCA
ICGC
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
SIDM00845
Burkitt's Lymphoma
GDSC
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
SIDM00461
Acute Myeloid Leukemia
GDSC
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
SIDM01519
Head and Neck Carcinoma
GDSC
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
ACH-000786
Lymphoma
CCLE
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
ACH-000992
Head and Neck Cancer
CCLE
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
ACH-001067
Brain Cancer
CCLE
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
GKENL
DEG_APCC_KENBOX_2
0.1944
p.T208S
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
GKENL
DEG_APCC_KENBOX_2
0.1944
p.S213F
SIDM00685
Glioblastoma
GDSC
GKENL
DEG_APCC_KENBOX_2
0.0556
p.S213F
ACH-000819
Brain Cancer
CCLE
GKENL
DEG_APCC_KENBOX_2
0.0556
p.S213F
LN-18
central_nervous_system
COSMIC
GKENL
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with EFNB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49454
Centromere protein F
DEG_APCC_KENBOX_2
3028:3032
GKENL
APC,CDC20,FZR1
0.9899
More...
Q15768
Ephrin-B3
DEG_APCC_KENBOX_2
199:203
GKENL
APC,CDC20,FZR1
0.8597
More...
Q86YD7
Protein FAM90A1
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9665
More...
Q8WXH0
Nesprin-2
DEG_APCC_KENBOX_2
1566:1570
GKENL
APC,CDC20,FZR1
0.7996
More...
A6NDY2
Putative protein FAM90A10
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9783
More...
A6NE21
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9697
More...
A6NEW6
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9477
More...
A6NIJ5
Putative protein FAM90A20P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9924
More...
A6NJQ4
Putative protein FAM90A8
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9623
More...
A6NKC0
Putative protein FAM90A7
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9691
More...
A6NNJ1
Putative protein FAM90A9
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9527
More...
A8MWA6
Putative protein FAM90A22
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9637
More...
A8MX19
Putative protein FAM90A12P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9571
More...
A8MXJ8
Putative protein FAM90A5P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9533
More...
A8MXZ1
Putative protein FAM90A23
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9521
More...
D6RGX4
Putative protein FAM90A26
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9836
More...
P0C7V4
Putative protein FAM90A15P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9428
More...
P0C7W8
Putative protein FAM90A13P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9618
More...
P0C7W9
Putative protein FAM90A14
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9533
More...
P0C7X0
Putative protein FAM90A24P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.9616
More...
Q658T7
Putative protein FAM90A2P
DEG_APCC_KENBOX_2
78:82
GKENL
APC,CDC20,FZR1
0.944
More...