DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
KKENG
Uniprot ID:
Q6PCB5
Source protein:
Lysine-specific demethylase RSBN1L
Source gene:
RSBN1L
Class:
DEG_APCC_KENBOX_2
Location:
223:227
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7823
ASA_SCORE:
103.32
COIL:
0.5722
CONS_SCORE:
0.4856
DSS_SCORE:
0.4798
HELIX:
0.391
FCONS_SCORE:
1.0136
RIG_SCORE:
0.7229
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V229L
TCGA-06-5416
GBM
TCGA
KKENG
DEG_APCC_KENBOX_2
0.2778
p.V229L
DO10880
GBM
ICGC
KKENG
DEG_APCC_KENBOX_2
0.2778
p.E228G
TCGA-43-8118
LUSC
TCGA
KKENG
DEG_APCC_KENBOX_2
0.3056
p.E228G
DO45471
LUSC
ICGC
KKENG
DEG_APCC_KENBOX_2
0.3056
p.K230N
TCGA-AG-A002
READ
TCGA
KKENG
DEG_APCC_KENBOX_2
0.3611
p.K230N
TCGA-DF-A2KU
UCEC
TCGA
KKENG
DEG_APCC_KENBOX_2
0.3611
p.K230N
DO223286
UCEC
ICGC
KKENG
DEG_APCC_KENBOX_2
0.3611
p.N220H
TCGA-AP-A1DV
UCEC
TCGA
KKENG
DEG_APCC_KENBOX_2
0.25
p.N220H
DO43186
UCEC
ICGC
KKENG
DEG_APCC_KENBOX_2
0.25
p.E228K
TCGA-BS-A0UV
UCEC
TCGA
KKENG
DEG_APCC_KENBOX_2
0.3056
p.E228K
DO42793
UCEC
ICGC
KKENG
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with RSBN1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q0VDF9
Heat shock 70 kDa protein 14
DEG_APCC_KENBOX_2
468:472
KKENG
APC,CDC20,FZR1
0.8284
More...
Q99741
Cell division control protein 6 homolog
DEG_APCC_KENBOX_2
80:84
KKENG
APC,CDC20,FZR1
0.9805
More...
Q9H788
SH2 domain-containing protein 4A
DEG_APCC_KENBOX_2
59:63
KKENG
APC,CDC20,FZR1
0.5489
More...
Q9Y639
Neuroplastin
DEG_APCC_KENBOX_2
273:277
KKENG
APC,CDC20,FZR1
0.5141
More...
Q6PCB5
Lysine-specific demethylase RSBN1L
DEG_APCC_KENBOX_2
223:227
KKENG
APC,CDC20,FZR1
0.7823
More...