DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KKENG
Uniprot ID:
Q9Y639
Source protein:
Neuroplastin
Source gene:
NPTN
Class:
DEG_APCC_KENBOX_2
Location:
273:277
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5141
ASA_SCORE:
93.48
COIL:
0.7988
CONS_SCORE:
0.4758
DSS_SCORE:
0.2997
HELIX:
0.0142
FCONS_SCORE:
0.7789
RIG_SCORE:
0.7935
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D268E
TCGA-28-1746
GBM
TCGA
KKENG
DEG_APCC_KENBOX_2
0.1944
p.D268E
DO13564
GBM
ICGC
KKENG
DEG_APCC_KENBOX_2
0.1944
p.I282V
TCGA-91-A4BD
LUAD
TCGA
KKENG
DEG_APCC_KENBOX_2
0.1944
p.I282V
DO45315
LUAD
ICGC
KKENG
DEG_APCC_KENBOX_2
0.1944
p.R272H
TCGA-BR-8591
STAD
TCGA
KKENG
DEG_APCC_KENBOX_2
0.3056
p.R272H
DO47973
STAD
ICGC
KKENG
DEG_APCC_KENBOX_2
0.3056
p.P267Q
TCGA-EE-A2GO
SKCM
TCGA
KKENG
DEG_APCC_KENBOX_2
0.1667
p.P267Q
DO37823
SKCM
ICGC
KKENG
DEG_APCC_KENBOX_2
0.1667
p.P265R
TCGA-W3-A825
SKCM
TCGA
KKENG
DEG_APCC_KENBOX_2
0.1111
p.P265R
DO51272
SKCM
ICGC
KKENG
DEG_APCC_KENBOX_2
0.1111
p.Q274K
DO229015
LICA
ICGC
KKENG
DEG_APCC_KENBOX_2
0.6944
p.K270T
DO41379
UCEC
ICGC
KKENG
DEG_APCC_KENBOX_2
0.25
p.P279H
SIDM00839
Colorectal Carcinoma
GDSC
KKENG
DEG_APCC_KENBOX_2
0.2778
p.P279H
ACH-000950
Colon/Colorectal Cancer
CCLE
KKENG
DEG_APCC_KENBOX_2
0.2778
p.P279H
LoVo
large_intestine
COSMIC
KKENG
DEG_APCC_KENBOX_2
0.2778
p.N266I
THP-1
haematopoietic_and_lymphoid_tissue
COSMIC
KKENG
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with NPTN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q0VDF9
Heat shock 70 kDa protein 14
DEG_APCC_KENBOX_2
468:472
KKENG
APC,CDC20,FZR1
0.8284
More...
Q99741
Cell division control protein 6 homolog
DEG_APCC_KENBOX_2
80:84
KKENG
APC,CDC20,FZR1
0.9805
More...
Q9H788
SH2 domain-containing protein 4A
DEG_APCC_KENBOX_2
59:63
KKENG
APC,CDC20,FZR1
0.5489
More...
Q9Y639
Neuroplastin
DEG_APCC_KENBOX_2
273:277
KKENG
APC,CDC20,FZR1
0.5141
More...
Q6PCB5
Lysine-specific demethylase RSBN1L
DEG_APCC_KENBOX_2
223:227
KKENG
APC,CDC20,FZR1
0.7823
More...