DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LKENG
Uniprot ID:
Q659C4
Source protein:
La-related protein 1B
Source gene:
LARP1B
Class:
DEG_APCC_KENBOX_2
Location:
702:706
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5766
ASA_SCORE:
84.62
COIL:
0.6628
CONS_SCORE:
0.5243
DSS_SCORE:
0.4322
HELIX:
0.3418
FCONS_SCORE:
1.0395
RIG_SCORE:
0.7227
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q710P
TCGA-A6-6780
COAD
TCGA
LKENG
DEG_APCC_KENBOX_2
0.2222
p.Q710P
DO10244
COAD
ICGC
LKENG
DEG_APCC_KENBOX_2
0.2222
p.Q709K
TCGA-CR-7389
HNSC
TCGA
LKENG
DEG_APCC_KENBOX_2
0.25
p.Q709K
DO14190
HNSC
ICGC
LKENG
DEG_APCC_KENBOX_2
0.25
p.P697S
TCGA-EB-A3Y7
SKCM
TCGA
LKENG
DEG_APCC_KENBOX_2
0.1944
p.P697S
DO37499
SKCM
ICGC
LKENG
DEG_APCC_KENBOX_2
0.1944
p.P697L
TCGA-EB-A3Y7
SKCM
TCGA
LKENG
DEG_APCC_KENBOX_2
0.1944
p.P697L
DO37499
SKCM
ICGC
LKENG
DEG_APCC_KENBOX_2
0.1944
p.H713N
TCGA-EE-A2GN
SKCM
TCGA
LKENG
DEG_APCC_KENBOX_2
0.1389
p.H713N
DO37896
SKCM
ICGC
LKENG
DEG_APCC_KENBOX_2
0.1389
p.E700K
TCGA-EE-A2MI
SKCM
TCGA
LKENG
DEG_APCC_KENBOX_2
0.2778
p.E700K
DO37531
SKCM
ICGC
LKENG
DEG_APCC_KENBOX_2
0.2778
p.L701H
TCGA-HU-8238
STAD
TCGA
LKENG
DEG_APCC_KENBOX_2
0.3056
p.R716C
TCGA-MA-AA42
CESC
TCGA
LKENG
DEG_APCC_KENBOX_2
0.0556
p.R716C
DO219724
CESC
ICGC
LKENG
DEG_APCC_KENBOX_2
0.0556
p.R716C
SIDM01469
Pancreatic Carcinoma
GDSC
LKENG
DEG_APCC_KENBOX_2
0.0556
p.R716C
ACH-000085
Pancreatic Cancer
CCLE
LKENG
DEG_APCC_KENBOX_2
0.0556
p.L714I
DO229050
LICA
ICGC
LKENG
DEG_APCC_KENBOX_2
0.2222
p.W703C
DO38551
STAD
ICGC
LKENG
DEG_APCC_KENBOX_2
0.7
p.R716H
SIDM00203
Ewing's Sarcoma
GDSC
LKENG
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with LARP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q659C4
La-related protein 1B
DEG_APCC_KENBOX_2
702:706
LKENG
APC,CDC20,FZR1
0.5766
More...
Q6PKG0
La-related protein 1
DEG_APCC_KENBOX_2
880:884
LKENG
APC,CDC20,FZR1
0.835
More...
Q8N1G1
RNA exonuclease 1 homolog
DEG_APCC_KENBOX_2
939:943
LKENG
APC,CDC20,FZR1
0.7159
More...
Q8WZ42
Titin
DEG_APCC_KENBOX_2
33685:33689
LKENG
APC,CDC20,FZR1
0.5202
More...
Q70EK8
Inactive ubiquitin carboxyl-terminal hydrolase 53
DEG_APCC_KENBOX_2
391:395
LKENG
APC,CDC20,FZR1
0.8999
More...
Q8IX06
Putative exonuclease GOR
DEG_APCC_KENBOX_2
380:384
LKENG
APC,CDC20,FZR1
0.667
More...