DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENG
Uniprot ID:
Q8N1G1
Source protein:
RNA exonuclease 1 homolog
Source gene:
REXO1
Class:
DEG_APCC_KENBOX_2
Location:
939:943
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7159
ASA_SCORE:
63.1
COIL:
0.3726
CONS_SCORE:
0.4706
DSS_SCORE:
0.4995
HELIX:
0.6248
FCONS_SCORE:
1.3002
RIG_SCORE:
0.6814
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R930M
TCGA-BQ-7053
KIRP
TCGA
LKENG
DEG_APCC_KENBOX_2
0.0833
p.R930M
DO20946
KIRP
ICGC
LKENG
DEG_APCC_KENBOX_2
0.0833
p.G953R
TCGA-EE-A2GB
SKCM
TCGA
LKENG
DEG_APCC_KENBOX_2
0.0556
p.G953R
DO222683
MELA
ICGC
LKENG
DEG_APCC_KENBOX_2
0.0556
p.G953R
DO37417
SKCM
ICGC
LKENG
DEG_APCC_KENBOX_2
0.0556
p.G953R
SIDM01612
Endometrial Carcinoma
GDSC
LKENG
DEG_APCC_KENBOX_2
0.0556
p.G953R
ACH-000946
Endometrial/Uterine Cancer
CCLE
LKENG
DEG_APCC_KENBOX_2
0.0556
p.E941D
TCGA-EY-A1GI
UCEC
TCGA
LKENG
DEG_APCC_KENBOX_2
0.6758
p.E941D
DO41211
UCEC
ICGC
LKENG
DEG_APCC_KENBOX_2
0.6758
p.H948L
DO222837
MELA
ICGC
LKENG
DEG_APCC_KENBOX_2
0.1944
p.N942S
ACH-000760
Brain Cancer
CCLE
LKENG
DEG_APCC_KENBOX_2
0.7069
Drug responses associated with REXO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q659C4
La-related protein 1B
DEG_APCC_KENBOX_2
702:706
LKENG
APC,CDC20,FZR1
0.5766
More...
Q6PKG0
La-related protein 1
DEG_APCC_KENBOX_2
880:884
LKENG
APC,CDC20,FZR1
0.835
More...
Q8N1G1
RNA exonuclease 1 homolog
DEG_APCC_KENBOX_2
939:943
LKENG
APC,CDC20,FZR1
0.7159
More...
Q8WZ42
Titin
DEG_APCC_KENBOX_2
33685:33689
LKENG
APC,CDC20,FZR1
0.5202
More...
Q70EK8
Inactive ubiquitin carboxyl-terminal hydrolase 53
DEG_APCC_KENBOX_2
391:395
LKENG
APC,CDC20,FZR1
0.8999
More...
Q8IX06
Putative exonuclease GOR
DEG_APCC_KENBOX_2
380:384
LKENG
APC,CDC20,FZR1
0.667
More...