DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PETST
Uniprot ID:
P54132
Source protein:
Bloom syndrome protein
Source gene:
BLM
Class:
DEG_SPOP_SBC_1
Location:
355:359
E3 ligase:
SPOP
DEGRON score:
0.986
ASA_SCORE:
86.02
COIL:
0.82
CONS_SCORE:
0.2148
DSS_SCORE:
0.5501
HELIX:
0.1602
FCONS_SCORE:
0.9908
RIG_SCORE:
0.7012
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M350I
TCGA-AP-A059
UCEC
TCGA
PETST
DEG_SPOP_SBC_1
0.1944
p.M350I
DO41361
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.M348I
TCGA-UC-A7PG
CESC
TCGA
PETST
DEG_SPOP_SBC_1
0.1389
p.M348I
DO51615
CESC
ICGC
PETST
DEG_SPOP_SBC_1
0.1389
p.M348I
DO229005
COCA
ICGC
PETST
DEG_SPOP_SBC_1
0.1389
p.M348I
SIDM00588
Oral Cavity Carcinoma
GDSC
PETST
DEG_SPOP_SBC_1
0.1389
p.M348I
SIDM01447
Glioblastoma
GDSC
PETST
DEG_SPOP_SBC_1
0.1389
p.M348I
HSC-4
upper_aerodigestive_tract
COSMIC
PETST
DEG_SPOP_SBC_1
0.1389
p.M348V
TCGA-Y8-A894
KIRP
TCGA
PETST
DEG_SPOP_SBC_1
0.1389
p.M348V
DO49798
KIRP
ICGC
PETST
DEG_SPOP_SBC_1
0.1389
p.E346K
DO223035
ESCA
ICGC
PETST
DEG_SPOP_SBC_1
0.0833
p.Q365L
DO228217
LICA
ICGC
PETST
DEG_SPOP_SBC_1
0.1667
p.I366T
SIDM01113
Other Sarcomas
GDSC
PETST
DEG_SPOP_SBC_1
0.1389
p.I366T
SK-UT-1
soft_tissue
COSMIC
PETST
DEG_SPOP_SBC_1
0.1389
p.K347N
SIDM00118
Colorectal Carcinoma
GDSC
PETST
DEG_SPOP_SBC_1
0.2222
p.K347N
ACH-001081
Colon/Colorectal Cancer
CCLE
PETST
DEG_SPOP_SBC_1
0.2222
p.K347N
HCC2998
large_intestine
COSMIC
PETST
DEG_SPOP_SBC_1
0.2222
Drug responses associated with BLM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
355:359
PETST
SPOP
0.986
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
266:270
PETST
SPOP
0.5927
More...
Q5BJH2
Transmembrane protein 128
DEG_SPOP_SBC_1
32:36
PETST
SPOP
0.8321
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8176:8180
PETST
SPOP
0.5974
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
1235:1239
PETST
SPOP
0.6169
More...
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
399:403
PETST
SPOP
0.9132
More...