DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PETST
Uniprot ID:
P56975
Source protein:
Pro-neuregulin-3, membrane-bound isoform
Source gene:
NRG3
Class:
DEG_SPOP_SBC_1
Location:
266:270
E3 ligase:
SPOP
DEGRON score:
0.5927
ASA_SCORE:
87.06
COIL:
0.8628
CONS_SCORE:
0.4644
DSS_SCORE:
0.5652
HELIX:
0.032
FCONS_SCORE:
1.1015
RIG_SCORE:
0.5747
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T277M
TCGA-55-8506
LUAD
TCGA
PETST
DEG_SPOP_SBC_1
0.1389
p.H275Y
TCGA-AG-A002
READ
TCGA
PETST
DEG_SPOP_SBC_1
0.1944
p.H275Y
TCGA-B5-A0JY
UCEC
TCGA
PETST
DEG_SPOP_SBC_1
0.1944
p.H275Y
TCGA-F5-6814
READ
TCGA
PETST
DEG_SPOP_SBC_1
0.1944
p.H275Y
DO8898
COAD
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.H275Y
DO233169
GACA
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.H275Y
DO36556
READ
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.H275Y
DO43041
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.T276M
TCGA-AP-A051
UCEC
TCGA
PETST
DEG_SPOP_SBC_1
0.1667
p.T276M
TCGA-BR-8680
STAD
TCGA
PETST
DEG_SPOP_SBC_1
0.1667
p.A261T
TCGA-AP-A056
UCEC
TCGA
PETST
DEG_SPOP_SBC_1
0.1944
p.A261T
DO43971
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.S271G
TCGA-D5-6927
COAD
TCGA
PETST
DEG_SPOP_SBC_1
0.3056
p.S271G
DO10332
COAD
ICGC
PETST
DEG_SPOP_SBC_1
0.3056
p.R278Q
DO44377
CESC
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.R278Q
DO234374
ESAD
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.R278Q
DO223130
ESCA
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.R261K
DO234395
ESAD
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.G259V
DO20786
KIRP
ICGC
PETST
DEG_SPOP_SBC_1
0.1389
p.G263C
DO229036
LICA
ICGC
PETST
DEG_SPOP_SBC_1
0.25
p.R261T
DO25508
LUAD
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.P275L
DO220877
MELA
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.P275L
DO52402
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.P275S
DO220877
MELA
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.S259F
DO222702
MELA
ICGC
PETST
DEG_SPOP_SBC_1
0.1389
p.G259R
DO51301
SKCM
ICGC
PETST
DEG_SPOP_SBC_1
0.1389
p.R272M
DO43634
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.2778
p.P258T
DO41584
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.L265F
DO41542
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.3056
p.R261I
DO52426
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.1944
p.S279R
DO42568
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.0833
p.T262A
SIDM00211
B-Lymphoblastic Leukemia
GDSC
PETST
DEG_SPOP_SBC_1
0.2222
p.V259F
SNG-M
endometrium
COSMIC
PETST
DEG_SPOP_SBC_1
0.1389
p.G280R
NCI-H522
lung
COSMIC
PETST
DEG_SPOP_SBC_1
0.0556
p.G280R
NCI-H1792
lung
COSMIC
PETST
DEG_SPOP_SBC_1
0.0556
p.D258E
NCI-H1581
lung
COSMIC
PETST
DEG_SPOP_SBC_1
0.1111
p.P259H
HMV-II
skin
COSMIC
PETST
DEG_SPOP_SBC_1
0.1389
p.R266K
K2
skin
COSMIC
PETST
DEG_SPOP_SBC_1
0.7237
p.K278E
MFE-296
endometrium
COSMIC
PETST
DEG_SPOP_SBC_1
0.1111
p.V259I
OCI-LY-19
haematopoietic_and_lymphoid_tissue
COSMIC
PETST
DEG_SPOP_SBC_1
0.1389
p.P266S
MRK-nu-1
breast
COSMIC
PETST
DEG_SPOP_SBC_1
0.6752
Drug responses associated with NRG3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
355:359
PETST
SPOP
0.986
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
266:270
PETST
SPOP
0.5927
More...
Q5BJH2
Transmembrane protein 128
DEG_SPOP_SBC_1
32:36
PETST
SPOP
0.8321
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8176:8180
PETST
SPOP
0.5974
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
1235:1239
PETST
SPOP
0.6169
More...
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
399:403
PETST
SPOP
0.9132
More...