DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PETST
Uniprot ID:
Q5BJH2
Source protein:
Transmembrane protein 128
Source gene:
TMEM128
Class:
DEG_SPOP_SBC_1
Location:
32:36
E3 ligase:
SPOP
DEGRON score:
0.8321
ASA_SCORE:
92.74
COIL:
0.7472
CONS_SCORE:
0.3679
DSS_SCORE:
0.6603
HELIX:
0.2386
FCONS_SCORE:
1.0649
RIG_SCORE:
0.6578
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L24R
TCGA-DD-A3A8
LIHC
TCGA
PETST
DEG_SPOP_SBC_1
0.1111
p.V37F
TCGA-DD-AACT
LIHC
TCGA
PETST
DEG_SPOP_SBC_1
0.3056
p.H27Y
TCGA-EE-A29R
SKCM
TCGA
PETST
DEG_SPOP_SBC_1
0.1944
p.A34T
TCGA-EO-A3AZ
UCEC
TCGA
PETST
DEG_SPOP_SBC_1
0.7139
p.K43E
DO223732
CESC
ICGC
PETST
DEG_SPOP_SBC_1
0.25
p.V38F
DO234152
ESAD
ICGC
PETST
DEG_SPOP_SBC_1
0.2778
p.D29E
DO229027
LICA
ICGC
PETST
DEG_SPOP_SBC_1
0.25
p.K43T
DO47769
STAD
ICGC
PETST
DEG_SPOP_SBC_1
0.25
p.A30S
DO229272
THCA
ICGC
PETST
DEG_SPOP_SBC_1
0.2778
p.K40Q
DO43306
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.3333
p.P32L
ACH-001528
Thyroid Cancer
CCLE
PETST
DEG_SPOP_SBC_1
0.7582
Drug responses associated with TMEM128 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
355:359
PETST
SPOP
0.986
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
266:270
PETST
SPOP
0.5927
More...
Q5BJH2
Transmembrane protein 128
DEG_SPOP_SBC_1
32:36
PETST
SPOP
0.8321
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8176:8180
PETST
SPOP
0.5974
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
1235:1239
PETST
SPOP
0.6169
More...
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
399:403
PETST
SPOP
0.9132
More...