DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PETST
Uniprot ID:
Q9Y572
Source protein:
Receptor-interacting serine/threonine-protein kinase 3
Source gene:
RIPK3
Class:
DEG_SPOP_SBC_1
Location:
399:403
E3 ligase:
SPOP
DEGRON score:
0.9132
ASA_SCORE:
91.28
COIL:
0.886
CONS_SCORE:
0.3115
DSS_SCORE:
0.8727
HELIX:
0.0794
FCONS_SCORE:
0.9879
RIG_SCORE:
0.6167
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S391L
TCGA-AA-A00N
COAD
TCGA
PETST
DEG_SPOP_SBC_1
0.1111
p.S391L
DO9876
COAD
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.S391L
SIDM01276
Colorectal Carcinoma
GDSC
PETST
DEG_SPOP_SBC_1
0.1111
p.P409S
TCGA-CK-4951
COAD
TCGA
PETST
DEG_SPOP_SBC_1
0.1667
p.P409S
DO10582
COAD
ICGC
PETST
DEG_SPOP_SBC_1
0.1667
p.P409H
TCGA-D3-A2J6
SKCM
TCGA
PETST
DEG_SPOP_SBC_1
0.1667
p.P409H
DO37901
SKCM
ICGC
PETST
DEG_SPOP_SBC_1
0.1667
p.P411S
TCGA-EE-A29L
SKCM
TCGA
PETST
DEG_SPOP_SBC_1
0.1111
p.P411S
DO222599
MELA
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.P411S
DO37835
SKCM
ICGC
PETST
DEG_SPOP_SBC_1
0.1111
p.D390Y
TCGA-FI-A2D0
UCEC
TCGA
PETST
DEG_SPOP_SBC_1
0.0833
p.D390Y
DO43891
UCEC
ICGC
PETST
DEG_SPOP_SBC_1
0.0833
p.A393D
DO228952
LICA
ICGC
PETST
DEG_SPOP_SBC_1
0.1667
p.S410R
DO229036
LICA
ICGC
PETST
DEG_SPOP_SBC_1
0.5833
p.T403A
SIDM01711
Non-Cancerous
GDSC
PETST
DEG_SPOP_SBC_1
0.7139
p.T403A
ACH-002350
Non-Cancerous
CCLE
PETST
DEG_SPOP_SBC_1
0.7139
p.T403P
SIDM00368
Small Cell Lung Carcinoma
GDSC
PETST
DEG_SPOP_SBC_1
0.7031
Drug responses associated with RIPK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
355:359
PETST
SPOP
0.986
More...
P56975
Pro-neuregulin-3, membrane-bound isoform
DEG_SPOP_SBC_1
266:270
PETST
SPOP
0.5927
More...
Q5BJH2
Transmembrane protein 128
DEG_SPOP_SBC_1
32:36
PETST
SPOP
0.8321
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8176:8180
PETST
SPOP
0.5974
More...
Q9NR48
Histone-lysine N-methyltransferase ASH1L
DEG_SPOP_SBC_1
1235:1239
PETST
SPOP
0.6169
More...
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
399:403
PETST
SPOP
0.9132
More...