DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKENP
Uniprot ID:
O60423
Source protein:
Phospholipid-transporting ATPase IK
Source gene:
ATP8B3
Class:
DEG_APCC_KENBOX_2
Location:
527:531
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8774
ASA_SCORE:
77.66
COIL:
0.8056
CONS_SCORE:
0.2988
DSS_SCORE:
0.3915
HELIX:
0.1268
FCONS_SCORE:
0.8654
RIG_SCORE:
0.7789
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A538T
TCGA-CV-6953
HNSC
TCGA
PKENP
DEG_APCC_KENBOX_2
0.1389
p.A538T
DO14278
HNSC
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1389
p.E529K
TCGA-D3-A8GI
SKCM
TCGA
PKENP
DEG_APCC_KENBOX_2
0.7022
p.E529K
DO50284
SKCM
ICGC
PKENP
DEG_APCC_KENBOX_2
0.7022
p.E529D
TCGA-E6-A1M0
UCEC
TCGA
PKENP
DEG_APCC_KENBOX_2
0.6758
p.E529D
DO43682
UCEC
ICGC
PKENP
DEG_APCC_KENBOX_2
0.6758
p.Y532C
TCGA-HU-A4GN
STAD
TCGA
PKENP
DEG_APCC_KENBOX_2
0.3056
p.Y532C
DO47833
STAD
ICGC
PKENP
DEG_APCC_KENBOX_2
0.3056
p.E522A
TCGA-WE-A8K5
SKCM
TCGA
PKENP
DEG_APCC_KENBOX_2
0.1944
p.E522A
DO51282
SKCM
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1944
p.K520N
DO222892
BTCA
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1389
p.K520N
DO41193
UCEC
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1389
p.K520Q
DO8898
COAD
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1389
p.P518T
DO222798
COCA
ICGC
PKENP
DEG_APCC_KENBOX_2
0.0833
p.F523V
DO52692
MALY
ICGC
PKENP
DEG_APCC_KENBOX_2
0.2222
p.G519E
DO220891
MELA
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1111
p.Y532D
SIDM00773
Non-Cancerous
GDSC
PKENP
DEG_APCC_KENBOX_2
0.3056
p.Y532D
SIDM00967
Ovarian Carcinoma
GDSC
PKENP
DEG_APCC_KENBOX_2
0.3056
p.S521T
SIDM01205
Acute Myeloid Leukemia
GDSC
PKENP
DEG_APCC_KENBOX_2
0.1667
p.S521T
SIDM01195
Acute Myeloid Leukemia
GDSC
PKENP
DEG_APCC_KENBOX_2
0.1667
p.S521T
ACH-000406
Leukemia
CCLE
PKENP
DEG_APCC_KENBOX_2
0.1667
p.S521T
ACH-002314
Leukemia
CCLE
PKENP
DEG_APCC_KENBOX_2
0.1667
p.S521T
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
PKENP
DEG_APCC_KENBOX_2
0.1667
p.F537L
SIDM00451
T-Lymphoblastic Leukemia
GDSC
PKENP
DEG_APCC_KENBOX_2
0.1667
p.F537L
ACH-000937
Leukemia
CCLE
PKENP
DEG_APCC_KENBOX_2
0.1667
p.F537L
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
PKENP
DEG_APCC_KENBOX_2
0.1667
p.W518G
HT
haematopoietic_and_lymphoid_tissue
COSMIC
PKENP
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with ATP8B3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60423
Phospholipid-transporting ATPase IK
DEG_APCC_KENBOX_2
527:531
PKENP
APC,CDC20,FZR1
0.8774
More...
P20908
Collagen alpha-1
DEG_APCC_KENBOX_2
1696:1700
PKENP
APC,CDC20,FZR1
0.9351
More...
P78524
DENN domain-containing protein 2B
DEG_APCC_KENBOX_2
496:500
PKENP
APC,CDC20,FZR1
0.9888
More...
Q8TAT2
Fibroblast growth factor-binding protein 3
DEG_APCC_KENBOX_2
195:199
PKENP
APC,CDC20,FZR1
0.9762
More...
Q70EK8
Inactive ubiquitin carboxyl-terminal hydrolase 53
DEG_APCC_KENBOX_2
629:633
PKENP
APC,CDC20,FZR1
0.9916
More...