DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKENP
Uniprot ID:
P20908
Source protein:
Collagen alpha-1
Source gene:
COL5A1
Class:
DEG_APCC_KENBOX_2
Location:
1696:1700
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9351
ASA_SCORE:
86.66
COIL:
0.9158
CONS_SCORE:
0.3493
DSS_SCORE:
0.3768
HELIX:
0.0452
FCONS_SCORE:
1.0056
RIG_SCORE:
0.726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1709H
TCGA-51-4080
LUSC
TCGA
PKENP
DEG_APCC_KENBOX_2
0.0833
p.R1709H
TCGA-FB-AAPP
PAAD
TCGA
PKENP
DEG_APCC_KENBOX_2
0.0833
p.R1709H
DO26441
LUSC
ICGC
PKENP
DEG_APCC_KENBOX_2
0.0833
p.R1709H
DO218963
PAAD
ICGC
PKENP
DEG_APCC_KENBOX_2
0.0833
p.E1688K
TCGA-AP-A1DK
UCEC
TCGA
PKENP
DEG_APCC_KENBOX_2
0.1111
p.E1688K
DO42033
UCEC
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1111
p.P1700Q
TCGA-D3-A2JN
SKCM
TCGA
PKENP
DEG_APCC_KENBOX_2
0.5924
p.P1700Q
DO47590
SKCM
ICGC
PKENP
DEG_APCC_KENBOX_2
0.5924
p.G1689R
TCGA-D3-A3MR
SKCM
TCGA
PKENP
DEG_APCC_KENBOX_2
0.1389
p.G1689R
DO47256
SKCM
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1389
p.E1688D
TCGA-FI-A2D5
UCEC
TCGA
PKENP
DEG_APCC_KENBOX_2
0.1111
p.E1688D
DO41331
UCEC
ICGC
PKENP
DEG_APCC_KENBOX_2
0.1111
p.P1696S
TCGA-XK-AAIW
PRAD
TCGA
PKENP
DEG_APCC_KENBOX_2
0.5641
p.P1696S
DO51407
PRAD
ICGC
PKENP
DEG_APCC_KENBOX_2
0.5641
p.E1698A
DO8264
COAD
ICGC
PKENP
DEG_APCC_KENBOX_2
0.7701
p.G1710W
DO228971
LICA
ICGC
PKENP
DEG_APCC_KENBOX_2
0.0556
p.K1708N
DO229008
LICA
ICGC
PKENP
DEG_APCC_KENBOX_2
0.2222
p.S1687F
DO229465
SKCA
ICGC
PKENP
DEG_APCC_KENBOX_2
0.0833
p.R1694H
SIDM01301
Esophageal Carcinoma
GDSC
PKENP
DEG_APCC_KENBOX_2
0.2778
p.G1689V
SIDM00365
Small Cell Lung Carcinoma
GDSC
PKENP
DEG_APCC_KENBOX_2
0.1389
p.G1689V
SBC-1
lung
COSMIC
PKENP
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with COL5A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60423
Phospholipid-transporting ATPase IK
DEG_APCC_KENBOX_2
527:531
PKENP
APC,CDC20,FZR1
0.8774
More...
P20908
Collagen alpha-1
DEG_APCC_KENBOX_2
1696:1700
PKENP
APC,CDC20,FZR1
0.9351
More...
P78524
DENN domain-containing protein 2B
DEG_APCC_KENBOX_2
496:500
PKENP
APC,CDC20,FZR1
0.9888
More...
Q8TAT2
Fibroblast growth factor-binding protein 3
DEG_APCC_KENBOX_2
195:199
PKENP
APC,CDC20,FZR1
0.9762
More...
Q70EK8
Inactive ubiquitin carboxyl-terminal hydrolase 53
DEG_APCC_KENBOX_2
629:633
PKENP
APC,CDC20,FZR1
0.9916
More...