DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKTST
Uniprot ID:
Q8IYT1
Source protein:
Golgi associated RAB2 interactor protein 4
Source gene:
GARIN4
Class:
DEG_SPOP_SBC_1
Location:
260:264
E3 ligase:
SPOP
DEGRON score:
0.961
ASA_SCORE:
86.58
COIL:
0.85
CONS_SCORE:
0.363
DSS_SCORE:
0.5301
HELIX:
0.1148
FCONS_SCORE:
1.1462
RIG_SCORE:
0.7494
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P270T
TCGA-55-8089
LUAD
TCGA
PKTST
DEG_SPOP_SBC_1
0.1667
p.P270T
DO23690
LUAD
ICGC
PKTST
DEG_SPOP_SBC_1
0.1667
p.A257V
TCGA-67-3771
LUAD
TCGA
PKTST
DEG_SPOP_SBC_1
0.25
p.A257V
DO25797
LUAD
ICGC
PKTST
DEG_SPOP_SBC_1
0.25
p.T272I
TCGA-D1-A103
UCEC
TCGA
PKTST
DEG_SPOP_SBC_1
0.1111
p.T272I
DO42312
UCEC
ICGC
PKTST
DEG_SPOP_SBC_1
0.1111
p.N256S
TCGA-DD-AACP
LIHC
TCGA
PKTST
DEG_SPOP_SBC_1
0.2222
p.N256S
DO52210
LIHC
ICGC
PKTST
DEG_SPOP_SBC_1
0.2222
p.P260S
TCGA-F5-6814
READ
TCGA
PKTST
DEG_SPOP_SBC_1
0.6752
p.P260S
DO36556
READ
ICGC
PKTST
DEG_SPOP_SBC_1
0.6752
p.S258F
TCGA-FW-A3R5
SKCM
TCGA
PKTST
DEG_SPOP_SBC_1
0.2778
p.S258F
DO37406
SKCM
ICGC
PKTST
DEG_SPOP_SBC_1
0.2778
p.N253S
DO229010
COCA
ICGC
PKTST
DEG_SPOP_SBC_1
0.1389
p.A271G
SIDM00935
Other Solid Cancers
GDSC
PKTST
DEG_SPOP_SBC_1
0.1389
p.A271G
ACH-002091
Skin Cancer
CCLE
PKTST
DEG_SPOP_SBC_1
0.1389
p.A271G
CAL-39
vulva
COSMIC
PKTST
DEG_SPOP_SBC_1
0.1389
p.A267D
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PKTST
DEG_SPOP_SBC_1
0.25
p.A267D
ACH-001127
Leukemia
CCLE
PKTST
DEG_SPOP_SBC_1
0.25
p.A267D
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PKTST
DEG_SPOP_SBC_1
0.25
p.T262P
SIDM00118
Colorectal Carcinoma
GDSC
PKTST
DEG_SPOP_SBC_1
0.7031
p.T262P
ACH-001081
Colon/Colorectal Cancer
CCLE
PKTST
DEG_SPOP_SBC_1
0.7031
p.T262P
HCC2998
large_intestine
COSMIC
PKTST
DEG_SPOP_SBC_1
0.7031
Drug responses associated with GARIN4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q70Z35
Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein
DEG_SPOP_SBC_1
948:952
PKTST
SPOP
0.9793
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
41:45
PKTST
SPOP
0.9606
More...
Q96NE9
FERM domain-containing protein 6
DEG_SPOP_SBC_1
534:538
PKTST
SPOP
0.7639
More...
Q9BW04
Specifically androgen-regulated gene protein
DEG_SPOP_SBC_1
503:507
PKTST
SPOP
0.5589
More...
Q8IYT1
Golgi associated RAB2 interactor protein 4
DEG_SPOP_SBC_1
260:264
PKTST
SPOP
0.961
More...