DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPAANVTPT
Uniprot ID:
P0DJD0
Source protein:
RANBP2-like and GRIP domain-containing protein 1
Source gene:
RGPD1
Class:
DEG_SIAH_1
Location:
875:883
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9983
ASA_SCORE:
80.6667
COIL:
0.8594
CONS_SCORE:
0.3943
DSS_SCORE:
0.4407
HELIX:
0.0537
FCONS_SCORE:
1.3892
RIG_SCORE:
0.7413
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P882L
TCGA-AK-3444
KIRC
TCGA
RPAANVTPT
DEG_SIAH_1
0.7582
p.P866A
COR-L321
NS
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
D-423MG
central_nervous_system
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
U-2-OS
bone
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
HOP-62
lung
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
DOHH-2
haematopoietic_and_lymphoid_tissue
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
NCI-H1755
lung
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
NCI-H196
lung
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
Hs746T
stomach
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.P866A
OV-90
ovary
COSMIC
RPAANVTPT
DEG_SIAH_1
0.0833
p.S878Y
NCI-H1688
lung
COSMIC
RPAANVTPT
DEG_SIAH_1
0.712
p.S870Y
NCI-H1688
lung
COSMIC
RPAANVTPT
DEG_SIAH_1
0.1944
Drug responses associated with RGPD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPAANVTPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9981
More...
Q99666
RANBP2-like and GRIP domain-containing protein 5/6
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9902
More...
A6NKT7
RanBP2-like and GRIP domain-containing protein 3
DEG_SIAH_1
891:899
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9985
More...
O14715
RANBP2-like and GRIP domain-containing protein 8
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9902
More...
P0DJD0
RANBP2-like and GRIP domain-containing protein 1
DEG_SIAH_1
875:883
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9983
More...
P0DJD1
RANBP2-like and GRIP domain-containing protein 2
DEG_SIAH_1
883:891
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9973
More...
Q7Z3J3
RanBP2-like and GRIP domain-containing protein 4
DEG_SIAH_1
891:899
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9992
More...