DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPAANVTPT
Uniprot ID:
Q7Z3J3
Source protein:
RanBP2-like and GRIP domain-containing protein 4
Source gene:
RGPD4
Class:
DEG_SIAH_1
Location:
891:899
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9992
ASA_SCORE:
81.6333
COIL:
0.8304
CONS_SCORE:
0.3071
DSS_SCORE:
0.4497
HELIX:
0.0342
FCONS_SCORE:
1.0769
RIG_SCORE:
0.7341
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G901C
TCGA-78-7146
LUAD
TCGA
RPAANVTPT
DEG_SIAH_1
0.2778
p.G901C
DO23717
LUAD
ICGC
RPAANVTPT
DEG_SIAH_1
0.2778
p.S886F
DO228017
SKCA
ICGC
RPAANVTPT
DEG_SIAH_1
0.1944
Drug responses associated with RGPD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPAANVTPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9981
More...
Q99666
RANBP2-like and GRIP domain-containing protein 5/6
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9902
More...
A6NKT7
RanBP2-like and GRIP domain-containing protein 3
DEG_SIAH_1
891:899
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9985
More...
O14715
RANBP2-like and GRIP domain-containing protein 8
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9902
More...
P0DJD0
RANBP2-like and GRIP domain-containing protein 1
DEG_SIAH_1
875:883
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9983
More...
P0DJD1
RANBP2-like and GRIP domain-containing protein 2
DEG_SIAH_1
883:891
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9973
More...
Q7Z3J3
RanBP2-like and GRIP domain-containing protein 4
DEG_SIAH_1
891:899
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9992
More...