DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RPAANVTPT
Uniprot ID:
P49792
Source protein:
E3 SUMO-protein ligase RanBP2
Source gene:
RANBP2
Class:
DEG_SIAH_1
Location:
890:898
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9981
ASA_SCORE:
70.0778
COIL:
0.8679
CONS_SCORE:
0.3578
DSS_SCORE:
0.3853
HELIX:
0.0913
FCONS_SCORE:
0.8775
RIG_SCORE:
0.7328
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N906S
TCGA-46-3768
LUSC
TCGA
RPAANVTPT
DEG_SIAH_1
0.1111
p.N906S
DO26466
LUSC
ICGC
RPAANVTPT
DEG_SIAH_1
0.1111
p.M905V
TCGA-85-8479
LUSC
TCGA
RPAANVTPT
DEG_SIAH_1
0.1389
p.M905V
DO45443
LUSC
ICGC
RPAANVTPT
DEG_SIAH_1
0.1389
p.P901S
TCGA-GN-A26C
SKCM
TCGA
RPAANVTPT
DEG_SIAH_1
0.25
p.P901S
DO37782
SKCM
ICGC
RPAANVTPT
DEG_SIAH_1
0.25
p.M905I
DO222798
COCA
ICGC
RPAANVTPT
DEG_SIAH_1
0.1389
p.M905T
SIDM00980
Gastric Carcinoma
GDSC
RPAANVTPT
DEG_SIAH_1
0.1389
p.M905T
ACH-000948
Gastric Cancer
CCLE
RPAANVTPT
DEG_SIAH_1
0.1389
p.M905T
23132-87
stomach
COSMIC
RPAANVTPT
DEG_SIAH_1
0.1389
p.V902G
ACH-000079
Non-Cancerous
CCLE
RPAANVTPT
DEG_SIAH_1
0.2222
Drug responses associated with RANBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RPAANVTPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9981
More...
Q99666
RANBP2-like and GRIP domain-containing protein 5/6
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9902
More...
A6NKT7
RanBP2-like and GRIP domain-containing protein 3
DEG_SIAH_1
891:899
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9985
More...
O14715
RANBP2-like and GRIP domain-containing protein 8
DEG_SIAH_1
890:898
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9902
More...
P0DJD0
RANBP2-like and GRIP domain-containing protein 1
DEG_SIAH_1
875:883
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9983
More...
P0DJD1
RANBP2-like and GRIP domain-containing protein 2
DEG_SIAH_1
883:891
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9973
More...
Q7Z3J3
RanBP2-like and GRIP domain-containing protein 4
DEG_SIAH_1
891:899
RPAANVTPT
SIAH1,SIAH2,SIAH3
0.9992
More...