DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENK
Uniprot ID:
Q9P2Y5
Source protein:
UV radiation resistance-associated gene protein
Source gene:
UVRAG
Class:
DEG_APCC_KENBOX_2
Location:
558:562
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9842
ASA_SCORE:
101.92
COIL:
0.6566
CONS_SCORE:
0.2506
DSS_SCORE:
0.4811
HELIX:
0.2892
FCONS_SCORE:
0.9866
RIG_SCORE:
0.6919
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D567Y
TCGA-44-7670
LUAD
TCGA
SKENK
DEG_APCC_KENBOX_2
0.1944
p.D567Y
TCGA-50-6590
LUAD
TCGA
SKENK
DEG_APCC_KENBOX_2
0.1944
p.D567Y
DO24692
LUAD
ICGC
SKENK
DEG_APCC_KENBOX_2
0.1944
p.D567Y
DO23555
LUAD
ICGC
SKENK
DEG_APCC_KENBOX_2
0.1944
p.S548C
TCGA-AR-A1AO
BRCA
TCGA
SKENK
DEG_APCC_KENBOX_2
0.0556
p.S548C
DO4443
BRCA
ICGC
SKENK
DEG_APCC_KENBOX_2
0.0556
p.S554F
TCGA-FW-A3R5
SKCM
TCGA
SKENK
DEG_APCC_KENBOX_2
0.6667
p.S554F
DO37406
SKCM
ICGC
SKENK
DEG_APCC_KENBOX_2
0.6667
p.G565R
TCGA-SJ-A6ZI
UCEC
TCGA
SKENK
DEG_APCC_KENBOX_2
0.25
p.G565R
DO219784
UCEC
ICGC
SKENK
DEG_APCC_KENBOX_2
0.25
p.V569L
SIDM00258
Neuroblastoma
GDSC
SKENK
DEG_APCC_KENBOX_2
0.1389
p.V569L
NB12
autonomic_ganglia
COSMIC
SKENK
DEG_APCC_KENBOX_2
0.1389
p.L551F
SIDM00860
Head and Neck Carcinoma
GDSC
SKENK
DEG_APCC_KENBOX_2
0.1389
p.L551F
FADU
upper_aerodigestive_tract
COSMIC
SKENK
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with UVRAG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07947
Tyrosine-protein kinase Yes
DEG_APCC_KENBOX_2
6:10
SKENK
APC,CDC20,FZR1
0.999
More...
Q5VT06
Centrosome-associated protein 350
DEG_APCC_KENBOX_2
2663:2667
SKENK
APC,CDC20,FZR1
0.913
More...
Q96JM3
Chromosome alignment-maintaining phosphoprotein 1
DEG_APCC_KENBOX_2
666:670
SKENK
APC,CDC20,FZR1
0.9977
More...
Q9NPI1
Bromodomain-containing protein 7
DEG_APCC_KENBOX_2
291:295
SKENK
APC,CDC20,FZR1
0.8688
More...
Q9P2Y5
UV radiation resistance-associated gene protein
DEG_APCC_KENBOX_2
558:562
SKENK
APC,CDC20,FZR1
0.9842
More...