DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENT
Uniprot ID:
O60861
Source protein:
Growth arrest-specific protein 7
Source gene:
GAS7
Class:
DEG_APCC_KENBOX_2
Location:
169:173
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8832
ASA_SCORE:
96.18
COIL:
0.7942
CONS_SCORE:
0.3311
DSS_SCORE:
0.5194
HELIX:
0.083
FCONS_SCORE:
0.8278
RIG_SCORE:
0.6414
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G160E
TCGA-77-7142
LUSC
TCGA
SKENT
DEG_APCC_KENBOX_2
0.0833
p.G160R
TCGA-BF-AAP7
SKCM
TCGA
SKENT
DEG_APCC_KENBOX_2
0.0833
p.S163P
TCGA-BG-A222
UCEC
TCGA
SKENT
DEG_APCC_KENBOX_2
0.6111
p.T180M
TCGA-CD-A4MG
STAD
TCGA
SKENT
DEG_APCC_KENBOX_2
0.1389
p.S165N
TCGA-QF-A5YS
UCEC
TCGA
SKENT
DEG_APCC_KENBOX_2
0.6667
p.R178Q
DO233767
GACA
ICGC
SKENT
DEG_APCC_KENBOX_2
0.1944
p.R178Q
DO41422
UCEC
ICGC
SKENT
DEG_APCC_KENBOX_2
0.1944
p.Q163K
DO229028
LICA
ICGC
SKENT
DEG_APCC_KENBOX_2
0.6111
p.R178W
DO38727
STAD
ICGC
SKENT
DEG_APCC_KENBOX_2
0.1944
p.K182T
DO43907
UCEC
ICGC
SKENT
DEG_APCC_KENBOX_2
0.0833
p.K170T
SIDM00111
Glioma
GDSC
SKENT
DEG_APCC_KENBOX_2
0.7306
p.K170T
ACH-000232
Brain Cancer
CCLE
SKENT
DEG_APCC_KENBOX_2
0.7306
p.K170T
U251
central_nervous_system
COSMIC
SKENT
DEG_APCC_KENBOX_2
0.7306
p.S163L
SIDM01146
Gastric Carcinoma
GDSC
SKENT
DEG_APCC_KENBOX_2
0.6111
p.S163L
ACH-000932
Gastric Cancer
CCLE
SKENT
DEG_APCC_KENBOX_2
0.6111
p.S163L
NCI-SNU-1
stomach
COSMIC
SKENT
DEG_APCC_KENBOX_2
0.6111
p.I182V
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
SKENT
DEG_APCC_KENBOX_2
0.0833
p.D161Y
TE-4
oesophagus
COSMIC
SKENT
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with GAS7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60861
Growth arrest-specific protein 7
DEG_APCC_KENBOX_2
169:173
SKENT
APC,CDC20,FZR1
0.8832
More...
P56715
Oxygen-regulated protein 1
DEG_APCC_KENBOX_2
1347:1351
SKENT
APC,CDC20,FZR1
0.9775
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_APCC_KENBOX_2
1384:1388
SKENT
APC,CDC20,FZR1
0.9973
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_APCC_KENBOX_2
1818:1822
SKENT
APC,CDC20,FZR1
0.9945
More...
Q7Z5K2
Wings apart-like protein homolog
DEG_APCC_KENBOX_2
535:539
SKENT
APC,CDC20,FZR1
0.9938
More...
Q9NXR8
Inhibitor of growth protein 3
DEG_APCC_KENBOX_2
180:184
SKENT
APC,CDC20,FZR1
0.8218
More...