DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SKENT
Uniprot ID:
Q9NXR8
Source protein:
Inhibitor of growth protein 3
Source gene:
ING3
Class:
DEG_APCC_KENBOX_2
Location:
180:184
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8218
ASA_SCORE:
85.42
COIL:
0.7094
CONS_SCORE:
0.364
DSS_SCORE:
0.4947
HELIX:
0.2176
FCONS_SCORE:
0.9165
RIG_SCORE:
0.711
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T193A
TCGA-50-6594
LUAD
TCGA
SKENT
DEG_APCC_KENBOX_2
0.0833
p.T193A
DO24275
LUAD
ICGC
SKENT
DEG_APCC_KENBOX_2
0.0833
p.R188Q
TCGA-AA-A00N
COAD
TCGA
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
TCGA-AZ-4315
COAD
TCGA
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
TCGA-D8-A1J8
BRCA
TCGA
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
TCGA-VQ-A8P2
STAD
TCGA
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
DO1269
BRCA
ICGC
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
DO8842
COAD
ICGC
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
DO9876
COAD
ICGC
SKENT
DEG_APCC_KENBOX_2
0.2222
p.R188Q
DO51761
STAD
ICGC
SKENT
DEG_APCC_KENBOX_2
0.2222
p.K181T
TCGA-CA-6718
COAD
TCGA
SKENT
DEG_APCC_KENBOX_2
0.7306
p.K181T
DO7801
COAD
ICGC
SKENT
DEG_APCC_KENBOX_2
0.7306
p.Q191K
Raji
haematopoietic_and_lymphoid_tissue
COSMIC
SKENT
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with ING3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60861
Growth arrest-specific protein 7
DEG_APCC_KENBOX_2
169:173
SKENT
APC,CDC20,FZR1
0.8832
More...
P56715
Oxygen-regulated protein 1
DEG_APCC_KENBOX_2
1347:1351
SKENT
APC,CDC20,FZR1
0.9775
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_APCC_KENBOX_2
1384:1388
SKENT
APC,CDC20,FZR1
0.9973
More...
Q5UIP0
Telomere-associated protein RIF1
DEG_APCC_KENBOX_2
1818:1822
SKENT
APC,CDC20,FZR1
0.9945
More...
Q7Z5K2
Wings apart-like protein homolog
DEG_APCC_KENBOX_2
535:539
SKENT
APC,CDC20,FZR1
0.9938
More...
Q9NXR8
Inhibitor of growth protein 3
DEG_APCC_KENBOX_2
180:184
SKENT
APC,CDC20,FZR1
0.8218
More...