DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VFSTT
Uniprot ID:
Q8TEW0
Source protein:
Partitioning defective 3 homolog
Source gene:
PARD3
Class:
DEG_SPOP_SBC_1
Location:
442:446
E3 ligase:
SPOP
DEGRON score:
0.5367
ASA_SCORE:
85.44
COIL:
0.8632
CONS_SCORE:
0.2554
DSS_SCORE:
0.5164
HELIX:
0.0376
FCONS_SCORE:
0.6097
RIG_SCORE:
0.71
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y451H
TCGA-CM-5861
COAD
TCGA
VFSTT
DEG_SPOP_SBC_1
0.1944
p.Y451H
DO7918
COAD
ICGC
VFSTT
DEG_SPOP_SBC_1
0.1944
p.S433Y
TCGA-UY-A8OB
BLCA
TCGA
VFSTT
DEG_SPOP_SBC_1
0.0833
p.S433Y
DO219037
BLCA
ICGC
VFSTT
DEG_SPOP_SBC_1
0.0833
p.Y451C
TCGA-ZP-A9D2
LIHC
TCGA
VFSTT
DEG_SPOP_SBC_1
0.1944
p.Y451C
DO52333
LIHC
ICGC
VFSTT
DEG_SPOP_SBC_1
0.1944
p.T446N
DO229045
LICA
ICGC
VFSTT
DEG_SPOP_SBC_1
0.7055
p.T453N
DO229224
THCA
ICGC
VFSTT
DEG_SPOP_SBC_1
0.1389
p.N452D
SIDM00962
Chronic Myelogenous Leukemia
GDSC
VFSTT
DEG_SPOP_SBC_1
0.1667
p.A454V
TE-9
oesophagus
COSMIC
VFSTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PARD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02505
Mucin-3A
DEG_SPOP_SBC_1
2702:2706
VFSTT
SPOP
0.9768
More...
Q49MG5
Microtubule-associated protein 9
DEG_SPOP_SBC_1
5:9
VFSTT
SPOP
0.9925
More...
Q8TEW0
Partitioning defective 3 homolog
DEG_SPOP_SBC_1
442:446
VFSTT
SPOP
0.5367
More...
Q8WWL7
G2/mitotic-specific cyclin-B3
DEG_SPOP_SBC_1
1059:1063
VFSTT
SPOP
0.8676
More...
Q9P2E2
Kinesin-like protein KIF17
DEG_SPOP_SBC_1
500:504
VFSTT
SPOP
0.8533
More...