DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VFSTT
Uniprot ID:
Q8WWL7
Source protein:
G2/mitotic-specific cyclin-B3
Source gene:
CCNB3
Class:
DEG_SPOP_SBC_1
Location:
1059:1063
E3 ligase:
SPOP
DEGRON score:
0.8676
ASA_SCORE:
85.64
COIL:
0.8406
CONS_SCORE:
0.3891
DSS_SCORE:
0.4436
HELIX:
0.0314
FCONS_SCORE:
1.0117
RIG_SCORE:
0.7868
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1055N
TCGA-44-A479
LUAD
TCGA
VFSTT
DEG_SPOP_SBC_1
0.2222
p.T1055N
DO23633
LUAD
ICGC
VFSTT
DEG_SPOP_SBC_1
0.2222
p.L1049F
TCGA-66-2785
LUSC
TCGA
VFSTT
DEG_SPOP_SBC_1
0.0556
p.L1049F
DO26520
LUSC
ICGC
VFSTT
DEG_SPOP_SBC_1
0.0556
p.P1057T
TCGA-EU-5905
KIRC
TCGA
VFSTT
DEG_SPOP_SBC_1
0.2778
p.P1057T
DO18622
KIRC
ICGC
VFSTT
DEG_SPOP_SBC_1
0.2778
p.E1065D
DO228474
LICA
ICGC
VFSTT
DEG_SPOP_SBC_1
0.2778
p.IP1050IA
DO222749
MELA
ICGC
VFSTT
DEG_SPOP_SBC_1
0
p.S1056N
SIDM01070
Non-Small Cell Lung Carcinoma
GDSC
VFSTT
DEG_SPOP_SBC_1
0.25
p.S1056N
ACH-000840
Lung Cancer
CCLE
VFSTT
DEG_SPOP_SBC_1
0.25
p.S1056N
HCC-366
lung
COSMIC
VFSTT
DEG_SPOP_SBC_1
0.25
p.S1071F
SIDM01245
T-Lymphoblastic Leukemia
GDSC
VFSTT
DEG_SPOP_SBC_1
0.1111
p.S1071F
ACH-002216
Leukemia
CCLE
VFSTT
DEG_SPOP_SBC_1
0.1111
p.S1071F
BE-13
haematopoietic_and_lymphoid_tissue
COSMIC
VFSTT
DEG_SPOP_SBC_1
0.1111
p.E1069D
SIDM00534
Colorectal Carcinoma
GDSC
VFSTT
DEG_SPOP_SBC_1
0.1667
p.E1069D
ACH-000986
Colon/Colorectal Cancer
CCLE
VFSTT
DEG_SPOP_SBC_1
0.1667
p.E1069D
HT-115
large_intestine
COSMIC
VFSTT
DEG_SPOP_SBC_1
0.1667
p.S1071Y
ACH-000109
Lung Cancer
CCLE
VFSTT
DEG_SPOP_SBC_1
0.1111
Drug responses associated with CCNB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02505
Mucin-3A
DEG_SPOP_SBC_1
2702:2706
VFSTT
SPOP
0.9768
More...
Q49MG5
Microtubule-associated protein 9
DEG_SPOP_SBC_1
5:9
VFSTT
SPOP
0.9925
More...
Q8TEW0
Partitioning defective 3 homolog
DEG_SPOP_SBC_1
442:446
VFSTT
SPOP
0.5367
More...
Q8WWL7
G2/mitotic-specific cyclin-B3
DEG_SPOP_SBC_1
1059:1063
VFSTT
SPOP
0.8676
More...
Q9P2E2
Kinesin-like protein KIF17
DEG_SPOP_SBC_1
500:504
VFSTT
SPOP
0.8533
More...