DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGSTT
Uniprot ID:
A8CG34
Source protein:
Nuclear envelope pore membrane protein POM 121C
Source gene:
POM121C
Class:
DEG_SPOP_SBC_1
Location:
1145:1149
E3 ligase:
SPOP
DEGRON score:
0.989
ASA_SCORE:
75.56
COIL:
0.9424
CONS_SCORE:
0.6649
DSS_SCORE:
0.5009
HELIX:
0.0138
FCONS_SCORE:
0.8968
RIG_SCORE:
0.7123
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F1141C
DO7801
COAD
ICGC
VGSTT
DEG_SPOP_SBC_1
0.2222
p.F1143L
DO8778
COAD
ICGC
VGSTT
DEG_SPOP_SBC_1
0.2778
p.G1146V
DO229250
THCA
ICGC
VGSTT
DEG_SPOP_SBC_1
0.6421
p.G1136S
DO41518
UCEC
ICGC
VGSTT
DEG_SPOP_SBC_1
0.0833
p.E1150Q
ACH-000685
Pancreatic Cancer
CCLE
VGSTT
DEG_SPOP_SBC_1
0.3056
p.A1159T
SNU-1040
large_intestine
COSMIC
VGSTT
DEG_SPOP_SBC_1
0.0556
Drug responses associated with POM121C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
1145:1149
VGSTT
SPOP
0.989
More...
P37275
Zinc finger E-box-binding homeobox 1
DEG_SPOP_SBC_1
691:695
VGSTT
SPOP
0.9133
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
5117:5121
VGSTT
SPOP
0.987
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
5127:5131
VGSTT
SPOP
0.9091
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2508:2512
VGSTT
SPOP
0.8332
More...
Q9UQ52
Contactin-6
DEG_SPOP_SBC_1
743:747
VGSTT
SPOP
0.8232
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
750:754
VGSTT
SPOP
0.9976
More...