DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VHTTS
Uniprot ID:
Q8IWE5
Source protein:
Pleckstrin homology domain-containing family M member 2
Source gene:
PLEKHM2
Class:
DEG_SPOP_SBC_1
Location:
288:292
E3 ligase:
SPOP
DEGRON score:
0.8723
ASA_SCORE:
88.48
COIL:
0.8446
CONS_SCORE:
0.3685
DSS_SCORE:
0.7256
HELIX:
0.123
FCONS_SCORE:
1.0783
RIG_SCORE:
0.651
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V288M
TCGA-2W-A8YY
CESC
TCGA
VHTTS
DEG_SPOP_SBC_1
0.7208
p.T279I
TCGA-G4-6302
COAD
TCGA
VHTTS
DEG_SPOP_SBC_1
0.0833
p.D285Y
DO229035
LICA
ICGC
VHTTS
DEG_SPOP_SBC_1
0.25
p.T288M
DO38723
STAD
ICGC
VHTTS
DEG_SPOP_SBC_1
0.7423
p.A298T
SIDM01293
Colorectal Carcinoma
GDSC
VHTTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PLEKHM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YD7
Protein FAM90A1
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.6922
More...
Q8IWE5
Pleckstrin homology domain-containing family M member 2
DEG_SPOP_SBC_1
288:292
VHTTS
SPOP
0.8723
More...
Q92618
Zinc finger protein 516
DEG_SPOP_SBC_1
1134:1138
VHTTS
SPOP
0.9673
More...
A6NDY2
Putative protein FAM90A10
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.6026
More...
A6NE21
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.7681
More...
A6NKC0
Putative protein FAM90A7
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.7459
More...
A8MWA6
Putative protein FAM90A22
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.9225
More...
A8MXZ1
Putative protein FAM90A23
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.5879
More...
D6RGX4
Putative protein FAM90A26
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.976
More...
P0C7V4
Putative protein FAM90A15P
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.72
More...
P0C7W8
Putative protein FAM90A13P
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.9301
More...
P0C7W9
Putative protein FAM90A14
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.9792
More...
P0C7X0
Putative protein FAM90A24P
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.9832
More...
Q658T7
Putative protein FAM90A2P
DEG_SPOP_SBC_1
152:156
VHTTS
SPOP
0.8547
More...