DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VITST
Uniprot ID:
Q8TBN0
Source protein:
Guanine nucleotide exchange factor for Rab-3A
Source gene:
RAB3IL1
Class:
DEG_SPOP_SBC_1
Location:
161:165
E3 ligase:
SPOP
DEGRON score:
0.9826
ASA_SCORE:
77.34
COIL:
0.7544
CONS_SCORE:
0.4892
DSS_SCORE:
0.4817
HELIX:
0.1696
FCONS_SCORE:
0.8626
RIG_SCORE:
0.7686
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R171C
DO233882
GACA
ICGC
VITST
DEG_SPOP_SBC_1
0.1667
p.R171C
SIDM00217
Colorectal Carcinoma
GDSC
VITST
DEG_SPOP_SBC_1
0.1667
p.R171C
ACH-000999
Colon/Colorectal Cancer
CCLE
VITST
DEG_SPOP_SBC_1
0.1667
p.N170K
DO229026
LICA
ICGC
VITST
DEG_SPOP_SBC_1
0.1944
p.S164F
DO229051
LICA
ICGC
VITST
DEG_SPOP_SBC_1
0.9093
p.H174P
DO218908
SKCA
ICGC
VITST
DEG_SPOP_SBC_1
0.0833
p.T163M
SIDM01010
T-Cell Non-Hodgkin's Lymphoma
GDSC
VITST
DEG_SPOP_SBC_1
0.7423
p.T163M
ACH-000053
Lymphoma
CCLE
VITST
DEG_SPOP_SBC_1
0.7423
p.T162M
SNU-407
large_intestine
COSMIC
VITST
DEG_SPOP_SBC_1
0.7423
Drug responses associated with RAB3IL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VITST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q685J3
Mucin-17
DEG_SPOP_SBC_1
306:310
VITST
SPOP
0.8673
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3965:3969
VITST
SPOP
0.6873
More...
Q8TBN0
Guanine nucleotide exchange factor for Rab-3A
DEG_SPOP_SBC_1
161:165
VITST
SPOP
0.9826
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
6333:6337
VITST
SPOP
0.9371
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8088:8092
VITST
SPOP
0.9495
More...
Q6AHZ1
Zinc finger protein 518A
DEG_SPOP_SBC_1
1207:1211
VITST
SPOP
0.8555
More...