DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQTSS
Uniprot ID:
A6NDB9
Source protein:
Paralemmin-3
Source gene:
PALM3
Class:
DEG_SPOP_SBC_1
Location:
299:303
E3 ligase:
SPOP
DEGRON score:
0.9963
ASA_SCORE:
87.74
COIL:
0.8656
CONS_SCORE:
0.6603
DSS_SCORE:
0.5454
HELIX:
0.0764
FCONS_SCORE:
1.1238
RIG_SCORE:
0.7464
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S303L
TCGA-DD-AAD6
LIHC
TCGA
VQTSS
DEG_SPOP_SBC_1
0.8778
p.S303L
DO52224
LIHC
ICGC
VQTSS
DEG_SPOP_SBC_1
0.8778
p.G290R
TCGA-EO-A22U
UCEC
TCGA
VQTSS
DEG_SPOP_SBC_1
0.0833
p.G290R
DO43755
UCEC
ICGC
VQTSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with PALM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDB9
Paralemmin-3
DEG_SPOP_SBC_1
299:303
VQTSS
SPOP
0.9963
More...
O95201
Zinc finger protein 205
DEG_SPOP_SBC_1
207:211
VQTSS
SPOP
0.9657
More...
P23381
Tryptophan--tRNA ligase, cytoplasmic
DEG_SPOP_SBC_1
90:94
VQTSS
SPOP
0.8229
More...
Q96LL4
Uncharacterized protein C8orf48
DEG_SPOP_SBC_1
32:36
VQTSS
SPOP
0.9889
More...
Q99700
Ataxin-2
DEG_SPOP_SBC_1
885:889
VQTSS
SPOP
0.9482
More...
Q8WZ64
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
112:116
VQTSS
SPOP
0.9356
More...