DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VQTSS
Uniprot ID:
Q96LL4
Source protein:
Uncharacterized protein C8orf48
Source gene:
C8orf48
Class:
DEG_SPOP_SBC_1
Location:
32:36
E3 ligase:
SPOP
DEGRON score:
0.9889
ASA_SCORE:
76.82
COIL:
0.6778
CONS_SCORE:
0.4903
DSS_SCORE:
0.623
HELIX:
0.0798
FCONS_SCORE:
1.0447
RIG_SCORE:
0.6519
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N27T
TCGA-D1-A17Q
UCEC
TCGA
VQTSS
DEG_SPOP_SBC_1
0.1944
p.N27T
DO41903
UCEC
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1944
p.S41Y
TCGA-G4-6628
COAD
TCGA
VQTSS
DEG_SPOP_SBC_1
0.1944
p.S41Y
DO10132
COAD
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1944
p.N27K
TCGA-KN-8428
KICH
TCGA
VQTSS
DEG_SPOP_SBC_1
0.1944
p.N27K
DO220484
KICH
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1944
p.R44W
DO1138
BRCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1111
p.R44W
DO222706
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1111
p.R44Q
DO2647
BRCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1111
p.S39G
DO227646
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.25
p.S28F
DO229010
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.2222
p.S28F
DO229013
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.2222
p.S28F
DO229016
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.2222
p.S28F
DO229003
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.2222
p.S28F
DO229005
COCA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.2222
p.S28F
DO234285
ESAD
ICGC
VQTSS
DEG_SPOP_SBC_1
0.2222
p.G43A
DO233865
GACA
ICGC
VQTSS
DEG_SPOP_SBC_1
0.1389
p.T29A
SIDM02069
Colorectal Carcinoma
GDSC
VQTSS
DEG_SPOP_SBC_1
0.25
p.E23G
SIDM00282
Colorectal Carcinoma
GDSC
VQTSS
DEG_SPOP_SBC_1
0.0833
p.E23G
ACH-000998
Colon/Colorectal Cancer
CCLE
VQTSS
DEG_SPOP_SBC_1
0.0833
p.T29S
SIDM00382
Glioblastoma
GDSC
VQTSS
DEG_SPOP_SBC_1
0.25
p.T29S
ACH-000609
Brain Cancer
CCLE
VQTSS
DEG_SPOP_SBC_1
0.25
p.E31K
SIDM00870
Breast Carcinoma
GDSC
VQTSS
DEG_SPOP_SBC_1
0.3056
p.E31K
ACH-000725
Breast Cancer
CCLE
VQTSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with C8orf48 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VQTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDB9
Paralemmin-3
DEG_SPOP_SBC_1
299:303
VQTSS
SPOP
0.9963
More...
O95201
Zinc finger protein 205
DEG_SPOP_SBC_1
207:211
VQTSS
SPOP
0.9657
More...
P23381
Tryptophan--tRNA ligase, cytoplasmic
DEG_SPOP_SBC_1
90:94
VQTSS
SPOP
0.8229
More...
Q96LL4
Uncharacterized protein C8orf48
DEG_SPOP_SBC_1
32:36
VQTSS
SPOP
0.9889
More...
Q99700
Ataxin-2
DEG_SPOP_SBC_1
885:889
VQTSS
SPOP
0.9482
More...
Q8WZ64
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
112:116
VQTSS
SPOP
0.9356
More...