Search results: The pahtway p3989 has 32 genes in the original annotation. Currently, there are 25 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
847CAT-catalase11p13CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
272AMPD3-adenosine monophosphate deaminase 311p15CV:GWASdb
DMG:Wockner_2014
4925NUCB2HEL-S-109 | NEFAnucleobindin 211p15.1CV:GWASdb
CV:PGCnp
330BIRC3AIP1 | API2 | CIAP2 | HAIP1 | HIAP1 | MALT2 | MIHC | RNF49 | c-IAP2baculoviral IAP repeat containing 311q22CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
9764KIAA0513-KIAA051316q24.1CV:PGCnp
PMID:cooccur
4669NAGLUCMT2V | MPS-IIIB | MPS3B | NAG | UFHSDN-acetylglucosaminidase, alpha17q21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7077TIMP2CSC-21K | DDC8TIMP metallopeptidase inhibitor 217q25CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
2217FCGRTFCRN | alpha-chainFc fragment of IgG receptor and transporter19q13.3CV:PGCnp
2517FUCA1FUCAfucosidase, alpha-L- 1, tissue1p34CV:PGCnp
DMG:Wockner_2014
1471CST3ARMD11 | HEL-S-2cystatin C20p11.21Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
22913RALYHNRPCL2 | P542RALY heterogeneous nuclear ribonucleoprotein20q11.21-q11.23CV:PGCnp
3460IFNGR2AF-1 | IFGR2 | IFNGT1 | IMD28interferon gamma receptor 2 (interferon gamma transducer 1)21q22.11CV:PGCnp
DMG:Wockner_2014
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
2876GPX1GPXD | GSHPX1glutathione peroxidase 13p21.3CV:PGCnp
PMID:cooccur
6414SEPP1SELP | SEPP | SePselenoprotein P, plasma, 15q31CV:PGCnp
GO_Annotation
PMID:cooccur
7923HSD17B8D6S2245E | FABG | FABGL | H2-KE6 | HKE6 | KE6 | RING2 | SDR30C1 | dJ1033B10.9hydroxysteroid (17-beta) dehydrogenase 86p21.3CV:PGCnp
GSMA_I
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
7128TNFAIP3A20 | AISBL | OTUD7C | TNFA1P2TNF alpha induced protein 36q23CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
526ATP6V1B2ATP6B1B2 | ATP6B2 | HO57 | VATB | VPP3 | Vma2ATPase H+ transporting V1 subunit B28p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2683B4GALT1B4GAL-T1 | CDG2D | GGTB2 | GT1 | GTB | beta4Gal-T1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 19p13CV:PGCnp