DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AFSTS
Uniprot ID:
Q96J92
Source protein:
Serine/threonine-protein kinase WNK4
Source gene:
WNK4
Class:
DEG_SPOP_SBC_1
Location:
799:803
E3 ligase:
SPOP
DEGRON score:
0.6668
ASA_SCORE:
85.96
COIL:
0.8954
CONS_SCORE:
0.4459
DSS_SCORE:
0.587
HELIX:
0.0682
FCONS_SCORE:
0.9413
RIG_SCORE:
0.6179
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S804L
TCGA-CD-8527
STAD
TCGA
AFSTS
DEG_SPOP_SBC_1
0.3056
p.S804L
DO47739
STAD
ICGC
AFSTS
DEG_SPOP_SBC_1
0.3056
p.H794D
TCGA-DD-A1EE
LIHC
TCGA
AFSTS
DEG_SPOP_SBC_1
0.1944
p.H794D
DO22857
LIHC
ICGC
AFSTS
DEG_SPOP_SBC_1
0.1944
p.S805C
TCGA-LP-A4AV
CESC
TCGA
AFSTS
DEG_SPOP_SBC_1
0.2778
p.S805C
DO44275
CESC
ICGC
AFSTS
DEG_SPOP_SBC_1
0.2778
p.H794Q
SIDM00232
Kidney Carcinoma
GDSC
AFSTS
DEG_SPOP_SBC_1
0.1944
p.H794Q
NCC021
kidney
COSMIC
AFSTS
DEG_SPOP_SBC_1
0.1944
p.R795T
SIDM01030
Esophageal Squamous Cell Carcinoma
GDSC
AFSTS
DEG_SPOP_SBC_1
0.2222
p.R795T
ACH-000693
Esophageal Cancer
CCLE
AFSTS
DEG_SPOP_SBC_1
0.2222
p.R795T
KYSE-180
oesophagus
COSMIC
AFSTS
DEG_SPOP_SBC_1
0.2222
p.P813T
SIDM01206
Neuroblastoma
GDSC
AFSTS
DEG_SPOP_SBC_1
0.0556
p.P813T
ACH-002248
Neuroblastoma
CCLE
AFSTS
DEG_SPOP_SBC_1
0.0556
p.P813T
IMR-5
autonomic_ganglia
COSMIC
AFSTS
DEG_SPOP_SBC_1
0.0556
p.G808A
SIDM01695
Acute Myeloid Leukemia
GDSC
AFSTS
DEG_SPOP_SBC_1
0.1944
p.G808A
ACH-000166
Leukemia
CCLE
AFSTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with WNK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AFSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43157
Plexin-B1
DEG_SPOP_SBC_1
862:866
AFSTS
SPOP
0.9864
More...
Q6VMQ6
Activating transcription factor 7-interacting protein 1
DEG_SPOP_SBC_1
915:919
AFSTS
SPOP
0.9877
More...
Q6ZSB9
Zinc finger and BTB domain-containing protein 49
DEG_SPOP_SBC_1
242:246
AFSTS
SPOP
0.9947
More...
Q96J92
Serine/threonine-protein kinase WNK4
DEG_SPOP_SBC_1
799:803
AFSTS
SPOP
0.6668
More...
Q9H4B6
Protein salvador homolog 1
DEG_SPOP_SBC_1
59:63
AFSTS
SPOP
0.9968
More...
Q9Y4K1
Beta/gamma crystallin domain-containing protein 1
DEG_SPOP_SBC_1
861:865
AFSTS
SPOP
0.9833
More...