DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ASTTT
Uniprot ID:
Q96H15
Source protein:
T-cell immunoglobulin and mucin domain-containing protein 4
Source gene:
TIMD4
Class:
DEG_SPOP_SBC_1
Location:
134:138
E3 ligase:
SPOP
DEGRON score:
0.999
ASA_SCORE:
76.8
COIL:
0.9164
CONS_SCORE:
0.3743
DSS_SCORE:
0.528
HELIX:
0.013
FCONS_SCORE:
0.7868
RIG_SCORE:
0.7207
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R128C
TCGA-06-0190
GBM
TCGA
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
TCGA-CG-4300
STAD
TCGA
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
DO10975
GBM
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
DO38767
STAD
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
SIDM00945
Colorectal Carcinoma
GDSC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
SIDM00217
Colorectal Carcinoma
GDSC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
ACH-000895
Colon/Colorectal Cancer
CCLE
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
ACH-000999
Colon/Colorectal Cancer
CCLE
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
SNU-1040
large_intestine
COSMIC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128C
CL-34
large_intestine
COSMIC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R140K
TCGA-21-1079
LUSC
TCGA
ASTTT
DEG_SPOP_SBC_1
0.2778
p.R140K
TCGA-D3-A1Q6
SKCM
TCGA
ASTTT
DEG_SPOP_SBC_1
0.2778
p.R140K
DO26846
LUSC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.2778
p.R140K
DO37450
SKCM
ICGC
ASTTT
DEG_SPOP_SBC_1
0.2778
p.Q132L
TCGA-77-8136
LUSC
TCGA
ASTTT
DEG_SPOP_SBC_1
0.2778
p.Q132L
DO26593
LUSC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.2778
p.T137N
TCGA-86-7955
LUAD
TCGA
ASTTT
DEG_SPOP_SBC_1
0.7055
p.T137N
DO229045
LICA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.7055
p.T137N
DO23612
LUAD
ICGC
ASTTT
DEG_SPOP_SBC_1
0.7055
p.R147H
TCGA-A5-A0GA
UCEC
TCGA
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147H
TCGA-D1-A15X
UCEC
TCGA
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147H
DO43274
UCEC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147H
DO43763
UCEC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147C
TCGA-BH-A18F
BRCA
TCGA
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147C
DO4074
BRCA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147C
DO233020
GACA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147C
DO227579
ORCA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147C
SIDM00150
Colorectal Carcinoma
GDSC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R128H
TCGA-CM-4750
COAD
TCGA
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128H
TCGA-L5-A8NE
ESCA
TCGA
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128H
DO9298
COAD
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R128H
DO232761
PBCA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1667
p.R133G
TCGA-CV-A463
HNSC
TCGA
ASTTT
DEG_SPOP_SBC_1
0.3056
p.R133G
DO52066
HNSC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.3056
p.A142T
TCGA-DU-7302
LGG
TCGA
ASTTT
DEG_SPOP_SBC_1
0.2222
p.A142T
DO22728
LGG
ICGC
ASTTT
DEG_SPOP_SBC_1
0.2222
p.V127M
DO233776
GACA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1389
p.R147S
DO228986
LICA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.R147S
DO50737
LICA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.A134D
DO228986
LICA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.7793
p.T141K
DO229008
LICA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.25
p.T145I
DO222595
MELA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1389
p.Q132K
DO229232
THCA
ICGC
ASTTT
DEG_SPOP_SBC_1
0.2778
p.T138M
SIDM00220
Ovarian Carcinoma
GDSC
ASTTT
DEG_SPOP_SBC_1
0.7423
p.T138M
ACH-000962
Ovarian Cancer
CCLE
ASTTT
DEG_SPOP_SBC_1
0.7423
p.T138M
ACH-001145
Ovarian Cancer
CCLE
ASTTT
DEG_SPOP_SBC_1
0.7423
p.T138M
OC-314
ovary
COSMIC
ASTTT
DEG_SPOP_SBC_1
0.7423
Drug responses associated with TIMD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ASTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
424:428
ASTTT
SPOP
0.9865
More...
P81274
G-protein-signaling modulator 2
DEG_SPOP_SBC_1
519:523
ASTTT
SPOP
0.9496
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
2347:2351
ASTTT
SPOP
0.9971
More...
Q6ZVD8
PH domain leucine-rich repeat-containing protein phosphatase 2
DEG_SPOP_SBC_1
1056:1060
ASTTT
SPOP
0.9961
More...
Q96H15
T-cell immunoglobulin and mucin domain-containing protein 4
DEG_SPOP_SBC_1
134:138
ASTTT
SPOP
0.999
More...
Q9UPN6
SR-related and CTD-associated factor 8
DEG_SPOP_SBC_1
148:152
ASTTT
SPOP
0.9821
More...