DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ASTTT
Uniprot ID:
Q9UPN6
Source protein:
SR-related and CTD-associated factor 8
Source gene:
SCAF8
Class:
DEG_SPOP_SBC_1
Location:
148:152
E3 ligase:
SPOP
DEGRON score:
0.9821
ASA_SCORE:
78.82
COIL:
0.8068
CONS_SCORE:
0.2756
DSS_SCORE:
0.4498
HELIX:
0.168
FCONS_SCORE:
0.7797
RIG_SCORE:
0.7356
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P158Q
TCGA-EE-A181
SKCM
TCGA
ASTTT
DEG_SPOP_SBC_1
0.1667
p.N156T
TCGA-FS-A1ZK
SKCM
TCGA
ASTTT
DEG_SPOP_SBC_1
0.2222
p.A153P
TCGA-G9-A9S7
PRAD
TCGA
ASTTT
DEG_SPOP_SBC_1
0.3056
p.R153T
DO234283
ESAD
ICGC
ASTTT
DEG_SPOP_SBC_1
0.3056
p.R140Q
DO40884
UCEC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1111
p.H141Y
DO40843
UCEC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.1389
p.R153I
DO41572
UCEC
ICGC
ASTTT
DEG_SPOP_SBC_1
0.3056
p.V161L
SIDM01609
Endometrial Carcinoma
GDSC
ASTTT
DEG_SPOP_SBC_1
0.0833
p.P161S
ACH-000975
Lung Cancer
CCLE
ASTTT
DEG_SPOP_SBC_1
0.0833
p.N157Y
HT55
large_intestine
COSMIC
ASTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with SCAF8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ASTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
424:428
ASTTT
SPOP
0.9865
More...
P81274
G-protein-signaling modulator 2
DEG_SPOP_SBC_1
519:523
ASTTT
SPOP
0.9496
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
2347:2351
ASTTT
SPOP
0.9971
More...
Q6ZVD8
PH domain leucine-rich repeat-containing protein phosphatase 2
DEG_SPOP_SBC_1
1056:1060
ASTTT
SPOP
0.9961
More...
Q96H15
T-cell immunoglobulin and mucin domain-containing protein 4
DEG_SPOP_SBC_1
134:138
ASTTT
SPOP
0.999
More...
Q9UPN6
SR-related and CTD-associated factor 8
DEG_SPOP_SBC_1
148:152
ASTTT
SPOP
0.9821
More...