DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LKENL
Uniprot ID:
Q13796
Source protein:
Protein Shroom2
Source gene:
SHROOM2
Class:
DEG_APCC_KENBOX_2
Location:
1548:1552
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8846
ASA_SCORE:
80.78
COIL:
0.053
CONS_SCORE:
0.5746
DSS_SCORE:
0.3077
HELIX:
0.9504
FCONS_SCORE:
1.3739
RIG_SCORE:
0.7844
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1555C
TCGA-A3-3383
KIRC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.25
p.R1555C
TCGA-D1-A174
UCEC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.25
p.R1555C
DO231251
PACA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.25
p.R1555C
DO40900
UCEC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.25
p.D1553N
TCGA-AC-A23H
BRCA
TCGA
LKENL
DEG_APCC_KENBOX_2
0.3056
p.D1553N
DO2401
BRCA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.3056
p.A1545T
TCGA-AX-A1CE
UCEC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.25
p.A1545T
DO42280
UCEC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.25
p.E1556K
TCGA-AX-A2HC
UCEC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.2222
p.E1556K
DO41572
UCEC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.2222
p.R1557H
DO233119
GACA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.1944
p.R1557H
DO52365
LUSC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.1944
p.R1557H
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
LKENL
DEG_APCC_KENBOX_2
0.1944
p.R1557H
SIDM00489
Oral Cavity Carcinoma
GDSC
LKENL
DEG_APCC_KENBOX_2
0.1944
p.R1557H
SIDM00241
Breast Carcinoma
GDSC
LKENL
DEG_APCC_KENBOX_2
0.1944
p.A1545V
DO37409
SKCM
ICGC
LKENL
DEG_APCC_KENBOX_2
0.25
p.E1547D
SIDM00346
Chronic Myelogenous Leukemia
GDSC
LKENL
DEG_APCC_KENBOX_2
0.3056
p.E1547D
ACH-000301
Leukemia
CCLE
LKENL
DEG_APCC_KENBOX_2
0.3056
p.E1547D
LAMA-84
haematopoietic_and_lymphoid_tissue
COSMIC
LKENL
DEG_APCC_KENBOX_2
0.3056
p.E1550G
SIDM01617
Endometrial Carcinoma
GDSC
LKENL
DEG_APCC_KENBOX_2
0.7199
p.E1550G
ACH-000994
Endometrial/Uterine Cancer
CCLE
LKENL
DEG_APCC_KENBOX_2
0.7199
p.I1539T
ACH-001065
Breast Cancer
CCLE
LKENL
DEG_APCC_KENBOX_2
0.0833
p.I1539T
EVSA-T
breast
COSMIC
LKENL
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with SHROOM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13796
Protein Shroom2
DEG_APCC_KENBOX_2
1548:1552
LKENL
APC,CDC20,FZR1
0.8846
More...
Q16587
Zinc finger protein 74
DEG_APCC_KENBOX_2
22:26
LKENL
APC,CDC20,FZR1
0.6629
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_APCC_KENBOX_2
155:159
LKENL
APC,CDC20,FZR1
0.6187
More...
Q7Z7A1
Centriolin
DEG_APCC_KENBOX_2
2203:2207
LKENL
APC,CDC20,FZR1
0.7087
More...
Q8TF72
Protein Shroom3
DEG_APCC_KENBOX_2
1894:1898
LKENL
APC,CDC20,FZR1
0.8715
More...
Q8N1N0
C-type lectin domain family 4 member F
DEG_APCC_KENBOX_2
288:292
LKENL
APC,CDC20,FZR1
0.6441
More...