DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENL
Uniprot ID:
Q8TF72
Source protein:
Protein Shroom3
Source gene:
SHROOM3
Class:
DEG_APCC_KENBOX_2
Location:
1894:1898
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8715
ASA_SCORE:
83.1
COIL:
0.1098
CONS_SCORE:
0.6457
DSS_SCORE:
0.3596
HELIX:
0.8952
FCONS_SCORE:
1.4917
RIG_SCORE:
0.7695
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1901W
TCGA-39-5034
LUSC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.25
p.R1901W
DO26854
LUSC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.25
p.Q1887H
TCGA-A5-A0G2
UCEC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.1389
p.Q1887H
DO41235
UCEC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.1389
p.G1907D
TCGA-BR-8680
STAD
TCGA
LKENL
DEG_APCC_KENBOX_2
0.0833
p.G1907D
DO47769
STAD
ICGC
LKENL
DEG_APCC_KENBOX_2
0.0833
p.R1900C
TCGA-CA-6717
COAD
TCGA
LKENL
DEG_APCC_KENBOX_2
0.2778
p.R1900C
DO8264
COAD
ICGC
LKENL
DEG_APCC_KENBOX_2
0.2778
p.R1892W
TCGA-DC-5869
READ
TCGA
LKENL
DEG_APCC_KENBOX_2
0.2778
p.R1892W
DO36584
READ
ICGC
LKENL
DEG_APCC_KENBOX_2
0.2778
p.L1898M
TCGA-DX-AB2W
SARC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.5999
p.L1898M
DO220095
SARC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.5999
p.G1886V
TCGA-P6-A5OG
ACC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.1111
p.G1886V
DO228952
LICA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.1111
p.E1896Q
DO47156
RECA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.6744
p.R1900H
SIDM00216
Colorectal Carcinoma
GDSC
LKENL
DEG_APCC_KENBOX_2
0.2778
p.R1900H
ACH-000989
Colon/Colorectal Cancer
CCLE
LKENL
DEG_APCC_KENBOX_2
0.2778
p.R1900H
SNU-175
large_intestine
COSMIC
LKENL
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with SHROOM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13796
Protein Shroom2
DEG_APCC_KENBOX_2
1548:1552
LKENL
APC,CDC20,FZR1
0.8846
More...
Q16587
Zinc finger protein 74
DEG_APCC_KENBOX_2
22:26
LKENL
APC,CDC20,FZR1
0.6629
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_APCC_KENBOX_2
155:159
LKENL
APC,CDC20,FZR1
0.6187
More...
Q7Z7A1
Centriolin
DEG_APCC_KENBOX_2
2203:2207
LKENL
APC,CDC20,FZR1
0.7087
More...
Q8TF72
Protein Shroom3
DEG_APCC_KENBOX_2
1894:1898
LKENL
APC,CDC20,FZR1
0.8715
More...
Q8N1N0
C-type lectin domain family 4 member F
DEG_APCC_KENBOX_2
288:292
LKENL
APC,CDC20,FZR1
0.6441
More...