DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LKENL
Uniprot ID:
Q8N1N0
Source protein:
C-type lectin domain family 4 member F
Source gene:
CLEC4F
Class:
DEG_APCC_KENBOX_2
Location:
288:292
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6441
ASA_SCORE:
99.06
COIL:
0.171
CONS_SCORE:
0.6476
DSS_SCORE:
0.4001
HELIX:
0.827
FCONS_SCORE:
1.0985
RIG_SCORE:
0.7691
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E290K
TCGA-71-8520
LUAD
TCGA
LKENL
DEG_APCC_KENBOX_2
0.7022
p.E290K
TCGA-BF-A9VF
SKCM
TCGA
LKENL
DEG_APCC_KENBOX_2
0.7022
p.E290K
TCGA-FW-A3R5
SKCM
TCGA
LKENL
DEG_APCC_KENBOX_2
0.7022
p.E290K
DO48882
LUAD
ICGC
LKENL
DEG_APCC_KENBOX_2
0.7022
p.E290K
DO37406
SKCM
ICGC
LKENL
DEG_APCC_KENBOX_2
0.7022
p.E290K
DO219458
SKCM
ICGC
LKENL
DEG_APCC_KENBOX_2
0.7022
p.I285M
TCGA-73-4662
LUAD
TCGA
LKENL
DEG_APCC_KENBOX_2
0.25
p.I285M
DO24790
LUAD
ICGC
LKENL
DEG_APCC_KENBOX_2
0.25
p.Q286H
TCGA-AJ-A3BH
UCEC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.2778
p.Q286H
DO41638
UCEC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.2778
p.L278F
TCGA-BA-5152
HNSC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.0556
p.L278F
DO14393
HNSC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.0556
p.Q293H
TCGA-DD-A115
LIHC
TCGA
LKENL
DEG_APCC_KENBOX_2
0.3056
p.Q293H
DO22911
LIHC
ICGC
LKENL
DEG_APCC_KENBOX_2
0.3056
p.Q293K
DO229022
LICA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.3056
p.N294D
DO50842
LIRI
ICGC
LKENL
DEG_APCC_KENBOX_2
0.2778
p.S300F
DO222875
MELA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.1111
p.G287R
DO222843
MELA
ICGC
LKENL
DEG_APCC_KENBOX_2
0.3056
p.N282S
SIDM00134
Non-Small Cell Lung Carcinoma
GDSC
LKENL
DEG_APCC_KENBOX_2
0.1667
p.N282S
ACH-000825
Lung Cancer
CCLE
LKENL
DEG_APCC_KENBOX_2
0.1667
p.N282S
HOP-92
lung
COSMIC
LKENL
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with CLEC4F mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13796
Protein Shroom2
DEG_APCC_KENBOX_2
1548:1552
LKENL
APC,CDC20,FZR1
0.8846
More...
Q16587
Zinc finger protein 74
DEG_APCC_KENBOX_2
22:26
LKENL
APC,CDC20,FZR1
0.6629
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_APCC_KENBOX_2
155:159
LKENL
APC,CDC20,FZR1
0.6187
More...
Q7Z7A1
Centriolin
DEG_APCC_KENBOX_2
2203:2207
LKENL
APC,CDC20,FZR1
0.7087
More...
Q8TF72
Protein Shroom3
DEG_APCC_KENBOX_2
1894:1898
LKENL
APC,CDC20,FZR1
0.8715
More...
Q8N1N0
C-type lectin domain family 4 member F
DEG_APCC_KENBOX_2
288:292
LKENL
APC,CDC20,FZR1
0.6441
More...