DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENP
Uniprot ID:
Q9H6X5
Source protein:
Uncharacterized protein C19orf44
Source gene:
C19orf44
Class:
DEG_APCC_KENBOX_2
Location:
64:68
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5525
ASA_SCORE:
111.12
COIL:
0.842
CONS_SCORE:
0.3093
DSS_SCORE:
0.4496
HELIX:
0.0964
FCONS_SCORE:
0.9977
RIG_SCORE:
0.7634
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G71W
TCGA-17-Z015
LUAD
TCGA
LKENP
DEG_APCC_KENBOX_2
0.25
p.K65Q
TCGA-A2-A0SV
BRCA
TCGA
LKENP
DEG_APCC_KENBOX_2
0.6944
p.K65Q
DO1914
BRCA
ICGC
LKENP
DEG_APCC_KENBOX_2
0.6944
p.L64M
TCGA-J9-A8CN
PRAD
TCGA
LKENP
DEG_APCC_KENBOX_2
0.5999
p.L64M
DO219269
PRAD
ICGC
LKENP
DEG_APCC_KENBOX_2
0.5999
p.G71R
TCGA-OR-A5J5
ACC
TCGA
LKENP
DEG_APCC_KENBOX_2
0.25
p.G71R
DO10970
GBM
ICGC
LKENP
DEG_APCC_KENBOX_2
0.25
p.L57V
DO227535
BRCA
ICGC
LKENP
DEG_APCC_KENBOX_2
0.1389
p.P68T
DO227985
COCA
ICGC
LKENP
DEG_APCC_KENBOX_2
0.5919
p.E66K
DO220900
MELA
ICGC
LKENP
DEG_APCC_KENBOX_2
0.7022
p.P68H
SIDM00014
Colorectal Carcinoma
GDSC
LKENP
DEG_APCC_KENBOX_2
0.6583
Drug responses associated with C19orf44 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IVW4
Cyclin-dependent kinase-like 3
DEG_APCC_KENBOX_2
418:422
LKENP
APC,CDC20,FZR1
0.6018
More...
Q8TAM6
Ermin
DEG_APCC_KENBOX_2
79:83
LKENP
APC,CDC20,FZR1
0.9084
More...
Q96SB4
SRSF protein kinase 1
DEG_APCC_KENBOX_2
317:321
LKENP
APC,CDC20,FZR1
0.8488
More...
Q9BSI4
TERF1-interacting nuclear factor 2
DEG_APCC_KENBOX_2
340:344
LKENP
APC,CDC20,FZR1
0.8292
More...
Q9UQ84
Exonuclease 1
DEG_APCC_KENBOX_2
390:394
LKENP
APC,CDC20,FZR1
0.9695
More...
Q9H6X5
Uncharacterized protein C19orf44
DEG_APCC_KENBOX_2
64:68
LKENP
APC,CDC20,FZR1
0.5525
More...