DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PFTSS
Uniprot ID:
Q04206
Source protein:
Transcription factor p65
Source gene:
RELA
Class:
DEG_SPOP_SBC_1
Location:
350:354
E3 ligase:
SPOP
DEGRON score:
0.9593
ASA_SCORE:
69.72
COIL:
0.7922
CONS_SCORE:
0.3921
DSS_SCORE:
0.4547
HELIX:
0.153
FCONS_SCORE:
1.0421
RIG_SCORE:
0.7063
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D347Y
DO51612
CESC
ICGC
PFTSS
DEG_SPOP_SBC_1
0.25
p.S364R
DO230326
COCA
ICGC
PFTSS
DEG_SPOP_SBC_1
0.0556
p.S364R
DO233295
NACA
ICGC
PFTSS
DEG_SPOP_SBC_1
0.0556
p.S358I
DO50323
ESAD
ICGC
PFTSS
DEG_SPOP_SBC_1
0.2222
p.P350H
DO228948
LICA
ICGC
PFTSS
DEG_SPOP_SBC_1
0.7694
p.L355M
DO229038
LICA
ICGC
PFTSS
DEG_SPOP_SBC_1
0.3056
p.S351F
DO220906
MELA
ICGC
PFTSS
DEG_SPOP_SBC_1
0.7982
p.L362P
DO50127
STAD
ICGC
PFTSS
DEG_SPOP_SBC_1
0.1111
p.P350L
SIDM00545
Melanoma
GDSC
PFTSS
DEG_SPOP_SBC_1
0.7582
p.P350L
ACH-000987
Skin Cancer
CCLE
PFTSS
DEG_SPOP_SBC_1
0.7582
p.P350L
Mewo
skin
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.7582
p.S340F
SIDM01617
Endometrial Carcinoma
GDSC
PFTSS
DEG_SPOP_SBC_1
0.0556
p.S340F
ACH-000994
Endometrial/Uterine Cancer
CCLE
PFTSS
DEG_SPOP_SBC_1
0.0556
p.Q361H
KMH-2
thyroid
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.1389
p.Q361H
KURAMOCHI
ovary
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.1389
p.S359F
KURAMOCHI
ovary
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.1944
p.S359F
KMH-2
thyroid
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.1944
p.P347L
Mewo
skin
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.25
p.T362A
CCK-81
large_intestine
COSMIC
PFTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with RELA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PFTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P41162
ETS translocation variant 3
DEG_SPOP_SBC_1
284:288
PFTSS
SPOP
0.8799
More...
Q04206
Transcription factor p65
DEG_SPOP_SBC_1
350:354
PFTSS
SPOP
0.9593
More...
Q86UU0
B-cell CLL/lymphoma 9-like protein
DEG_SPOP_SBC_1
1070:1074
PFTSS
SPOP
0.9837
More...
Q8N680
Zinc finger and BTB domain-containing protein 2
DEG_SPOP_SBC_1
280:284
PFTSS
SPOP
0.6045
More...
Q9UBC2
Epidermal growth factor receptor substrate 15-like 1
DEG_SPOP_SBC_1
755:759
PFTSS
SPOP
0.6167
More...
Q9UIF8
Bromodomain adjacent to zinc finger domain protein 2B
DEG_SPOP_SBC_1
1646:1650
PFTSS
SPOP
0.9077
More...