DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PRSTT
Uniprot ID:
P01880
Source protein:
Immunoglobulin heavy constant delta
Source gene:
IGHD
Class:
DEG_SPOP_SBC_1
Location:
329:333
E3 ligase:
SPOP
DEGRON score:
0.8106
ASA_SCORE:
82.74
COIL:
0.8476
CONS_SCORE:
0.5793
DSS_SCORE:
0.4144
HELIX:
0.034
FCONS_SCORE:
1.1204
RIG_SCORE:
0.6882
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P326L
TCGA-23-1124
OV
TCGA
PRSTT
DEG_SPOP_SBC_1
0.25
p.R341H
TCGA-26-5135
GBM
TCGA
PRSTT
DEG_SPOP_SBC_1
0.1111
p.P322S
TCGA-27-1833
GBM
TCGA
PRSTT
DEG_SPOP_SBC_1
0.1389
p.P343Q
TCGA-EI-6507
READ
TCGA
PRSTT
DEG_SPOP_SBC_1
0.0556
p.A336V
TCGA-NH-A5IV
COAD
TCGA
PRSTT
DEG_SPOP_SBC_1
0.25
p.A335V
DO49095
COAD
ICGC
PRSTT
DEG_SPOP_SBC_1
0.2778
p.R340H
DO11447
GBM
ICGC
PRSTT
DEG_SPOP_SBC_1
0.1389
p.P321S
DO12976
GBM
ICGC
PRSTT
DEG_SPOP_SBC_1
0.1111
p.G329R
DO229346
LAML
ICGC
PRSTT
DEG_SPOP_SBC_1
0.7568
p.P324S
DO50970
LICA
ICGC
PRSTT
DEG_SPOP_SBC_1
0.1944
p.P328R
DO220877
MELA
ICGC
PRSTT
DEG_SPOP_SBC_1
0.3056
p.R340C
DO46356
OV
ICGC
PRSTT
DEG_SPOP_SBC_1
0.1389
p.R340C
DO34112
PACA
ICGC
PRSTT
DEG_SPOP_SBC_1
0.1389
p.P325L
DO32596
OV
ICGC
PRSTT
DEG_SPOP_SBC_1
0.2222
p.P342Q
DO36675
READ
ICGC
PRSTT
DEG_SPOP_SBC_1
0.0833
p.V339A
SIDM00216
Colorectal Carcinoma
GDSC
PRSTT
DEG_SPOP_SBC_1
0.1667
p.T333M
SIDM01162
Kidney Carcinoma
GDSC
PRSTT
DEG_SPOP_SBC_1
0.7423
Drug responses associated with IGHD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01880
Immunoglobulin heavy constant delta
DEG_SPOP_SBC_1
329:333
PRSTT
SPOP
0.8106
More...
P78559
Microtubule-associated protein 1A
DEG_SPOP_SBC_1
2647:2651
PRSTT
SPOP
0.9396
More...
Q06455
Protein CBFA2T1
DEG_SPOP_SBC_1
588:592
PRSTT
SPOP
0.993
More...
Q6IQ55
Tau-tubulin kinase 2
DEG_SPOP_SBC_1
1122:1126
PRSTT
SPOP
0.5437
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
252:256
PRSTT
SPOP
0.991
More...
Q9HCU4
Cadherin EGF LAG seven-pass G-type receptor 2
DEG_SPOP_SBC_1
378:382
PRSTT
SPOP
0.8201
More...