DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SPSSGE
Uniprot ID:
O60292
Source protein:
Signal-induced proliferation-associated 1-like protein 3
Source gene:
SIPA1L3
Class:
DEG_Kelch_Keap1_1
Location:
451:456
E3 ligase:
KEAP1
DEGRON score:
0.9304
ASA_SCORE:
71.2667
COIL:
0.8215
CONS_SCORE:
0.3235
DSS_SCORE:
0.5052
HELIX:
0.0737
FCONS_SCORE:
0.8272
RIG_SCORE:
0.5377
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P452L
TCGA-32-2616
GBM
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.6471
p.P452L
DO13462
GBM
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.6471
p.V442M
TCGA-86-8358
LUAD
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.V442M
TCGA-EO-A22U
UCEC
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.V442M
DO25471
LUAD
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.V442M
DO43755
UCEC
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.A466D
TCGA-AD-6964
COAD
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.A466D
DO8360
COAD
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.S465G
TCGA-AP-A054
UCEC
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.S465G
DO42256
UCEC
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.A460T
TCGA-BR-4257
STAD
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.2222
p.A460T
DO38683
STAD
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.2222
p.S448F
TCGA-FS-A4F9
SKCM
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.25
p.S448F
DO38069
SKCM
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.25
p.A466T
TCGA-VQ-A8PD
STAD
TCGA
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.A466T
DO51768
STAD
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0556
p.E456K
DO222636
ESCA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.7022
p.R446W
DO229346
LAML
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1944
p.S454I
DO229025
LICA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.7341
p.G457V
DO229024
LICA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.3056
p.S443I
DO229026
LICA
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.1111
p.S465N
DO23236
LINC
ICGC
SPSSGE
DEG_Kelch_Keap1_1
0.0833
p.A463V
SIDM00901
Endometrial Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.1389
p.A463V
ACH-000940
Endometrial/Uterine Cancer
CCLE
SPSSGE
DEG_Kelch_Keap1_1
0.1389
p.A463V
AN3-CA
endometrium
COSMIC
SPSSGE
DEG_Kelch_Keap1_1
0.1389
p.V449M
SIDM00415
B-Cell Non-Hodgkin's Lymphoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.V449M
ACH-001639
Leukemia
CCLE
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.V449M
ROS-50
haematopoietic_and_lymphoid_tissue
COSMIC
SPSSGE
DEG_Kelch_Keap1_1
0.2778
p.G455S
SIDM00163
Biliary Tract Carcinoma
GDSC
SPSSGE
DEG_Kelch_Keap1_1
0.6993
p.A447P
ACH-001554
Eye Cancer
CCLE
SPSSGE
DEG_Kelch_Keap1_1
0.2222
p.A447P
ACH-001955
Bone Cancer
CCLE
SPSSGE
DEG_Kelch_Keap1_1
0.2222
Drug responses associated with SIPA1L3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MU46
Smoothelin-like protein 1
DEG_Kelch_Keap1_1
320:325
SPSSGE
KEAP1
0.8915
More...
O15457
MutS protein homolog 4
DEG_Kelch_Keap1_1
17:22
SPSSGE
KEAP1
0.9846
More...
O60292
Signal-induced proliferation-associated 1-like protein 3
DEG_Kelch_Keap1_1
451:456
SPSSGE
KEAP1
0.9304
More...
Q6WKZ4
Rab11 family-interacting protein 1
DEG_Kelch_Keap1_1
717:722
SPSSGE
KEAP1
0.9938
More...
Q9UIF9
Bromodomain adjacent to zinc finger domain protein 2A
DEG_Kelch_Keap1_1
26:31
SPSSGE
KEAP1
0.9651
More...
Q6ZV50
DNA-binding protein RFX8
DEG_Kelch_Keap1_1
8:13
SPSSGE
KEAP1
0.8762
More...